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The map label for this gene is zntR [H]

Identifier: 187928725

GI number: 187928725

Start: 1725597

End: 1726028

Strand: Reverse

Name: zntR [H]

Synonym: Rpic_1642

Alternate gene names: 187928725

Gene position: 1726028-1725597 (Counterclockwise)

Preceding gene: 187928728

Following gene: 187928724

Centisome position: 43.78

GC content: 63.19

Gene sequence:

>432_bases
ATGAACATTCAGATCGGTGAATTCGCCAAGCGCACGGCCTGCCCGATTCAAACCATCCGGTACTACGAGCGCGAAGGCCT
GTTGCCGCCGCCGGACCGCAGCTCGGGCAACTTCCGGCTGTACAGCGAGCGGCACATTGAGCGGCTGCAGTTCATCCTCC
ACTGCCGGTCATTGGACATGCCGCTGAACGACGTGCGGACACTCCTGCGCTACCGCGAGCGACCGGACGAGGATTGCGGC
GCGGTGAACACCCTCCTGGACAAGCACATCGAGGAAGTCGAGCGGCGTATCGAGGCACTGGGGGTGTTAAAGCACCATTT
GTGCGCGCTGCGCGAGACCTGTTCCGACGGGCGAGCTGCAGAAGCTTGCGGAATCCTGCAGGGGTTGTCCGAAGGTAGCG
GCACGTGCACTGGAGACGGCACGCACCGCTGA

Upstream 100 bases:

>100_bases
CGCAATCACTCACAGCACCTCCCTTTGTCGCTTGAAATGGATTGGACTCAAGTACACACTCTATAGCTACTATAGAGTCA
AGGGACTTCGGCCCGACATC

Downstream 100 bases:

>100_bases
CACGAAGGGGAATGGCCGAACGGGTTCGCTATGTGACCCCTTCGGCCGCATGTTTTTTGACCAGCGCGACATCTGCGTCA
CGAAACATGAATTACAATCA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNIQIGEFAKRTACPIQTIRYYEREGLLPPPDRSSGNFRLYSERHIERLQFILHCRSLDMPLNDVRTLLRYRERPDEDCG
AVNTLLDKHIEEVERRIEALGVLKHHLCALRETCSDGRAAEACGILQGLSEGSGTCTGDGTHR

Sequences:

>Translated_143_residues
MNIQIGEFAKRTACPIQTIRYYEREGLLPPPDRSSGNFRLYSERHIERLQFILHCRSLDMPLNDVRTLLRYRERPDEDCG
AVNTLLDKHIEEVERRIEALGVLKHHLCALRETCSDGRAAEACGILQGLSEGSGTCTGDGTHR
>Mature_143_residues
MNIQIGEFAKRTACPIQTIRYYEREGLLPPPDRSSGNFRLYSERHIERLQFILHCRSLDMPLNDVRTLLRYRERPDEDCG
AVNTLLDKHIEEVERRIEALGVLKHHLCALRETCSDGRAAEACGILQGLSEGSGTCTGDGTHR

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=137, Percent_Identity=35.7664233576642, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1786695, Length=128, Percent_Identity=29.6875, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16250; Mature: 16250

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQIGEFAKRTACPIQTIRYYEREGLLPPPDRSSGNFRLYSERHIERLQFILHCRSLDM
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
PLNDVRTLLRYRERPDEDCGAVNTLLDKHIEEVERRIEALGVLKHHLCALRETCSDGRAA
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EACGILQGLSEGSGTCTGDGTHR
HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIQIGEFAKRTACPIQTIRYYEREGLLPPPDRSSGNFRLYSERHIERLQFILHCRSLDM
CCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
PLNDVRTLLRYRERPDEDCGAVNTLLDKHIEEVERRIEALGVLKHHLCALRETCSDGRAA
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EACGILQGLSEGSGTCTGDGTHR
HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]