| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928701
Identifier: 187928701
GI number: 187928701
Start: 1701539
End: 1702048
Strand: Direct
Name: 187928701
Synonym: Rpic_1618
Alternate gene names: NA
Gene position: 1701539-1702048 (Clockwise)
Preceding gene: 187928700
Following gene: 187928702
Centisome position: 43.16
GC content: 60.39
Gene sequence:
>510_bases ATGATTTCAATCCGTTCACCCGAATGCCAGGCGTTGGCATACAACTGTAAGCTTGACCCCCTCGGGGCAAGCGTTCTCAT GTCGCTCTCGCGCGTCTTGTCGTCGGTTGACCCGATCGGCAGCCGGGAGCTGCAGGAGCGTGCCGAATGGGCGGCAGAAC TTGCAGGAATGCAGGCCATCGATAGCGACCGCATTCCGGTCTTTGTAGCCGATGGCGGCTCGCTTGAGATGCACTTTCGC GATGGCCGCCGGCAGGGAAAGGAAGATGACGAATACGCCGAGCGTCACCCACCGACCGTTTGGTTTGGCAGGTGGCGAAT GGACTTTGACGGTCTGCGCGAAACACGCGCGAGCGTTGCGCAGTCGCCAGCAGGCTACCTCCCGGGGCTGGAAGTCTCGT ACCAAGGCGGAGATTGCGACGTGCATTACGGTGAAGCCGTGCCGACGCTTGAAGAGGCTGTTGCAGTCGCAAAGGAGCGC GAGAGCAATTGGCACCAGGCTGACGATTAA
Upstream 100 bases:
>100_bases CAGCCAGCCACACCAAATGACGCACCCATTCGTGGGTGCGTTTTTTTTGCCGTTTCGGCTTTGGCCGAAGCGGCAAAAGC CCTCTTAAGGAGGCTCAACC
Downstream 100 bases:
>100_bases ATCTCCACCTCAAGTCGCAGGATGGTCGTCAGTCATTGACGCCGCCGCATCACCATTTCATCCAACAACCCACGCGGGGT GCGTCCCCGATGGGGCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MISIRSPECQALAYNCKLDPLGASVLMSLSRVLSSVDPIGSRELQERAEWAAELAGMQAIDSDRIPVFVADGGSLEMHFR DGRRQGKEDDEYAERHPPTVWFGRWRMDFDGLRETRASVAQSPAGYLPGLEVSYQGGDCDVHYGEAVPTLEEAVAVAKER ESNWHQADD
Sequences:
>Translated_169_residues MISIRSPECQALAYNCKLDPLGASVLMSLSRVLSSVDPIGSRELQERAEWAAELAGMQAIDSDRIPVFVADGGSLEMHFR DGRRQGKEDDEYAERHPPTVWFGRWRMDFDGLRETRASVAQSPAGYLPGLEVSYQGGDCDVHYGEAVPTLEEAVAVAKER ESNWHQADD >Mature_169_residues MISIRSPECQALAYNCKLDPLGASVLMSLSRVLSSVDPIGSRELQERAEWAAELAGMQAIDSDRIPVFVADGGSLEMHFR DGRRQGKEDDEYAERHPPTVWFGRWRMDFDGLRETRASVAQSPAGYLPGLEVSYQGGDCDVHYGEAVPTLEEAVAVAKER ESNWHQADD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18756; Mature: 18756
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIRSPECQALAYNCKLDPLGASVLMSLSRVLSSVDPIGSRELQERAEWAAELAGMQAI CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC DSDRIPVFVADGGSLEMHFRDGRRQGKEDDEYAERHPPTVWFGRWRMDFDGLRETRASVA CCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHHH QSPAGYLPGLEVSYQGGDCDVHYGEAVPTLEEAVAVAKERESNWHQADD CCCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISIRSPECQALAYNCKLDPLGASVLMSLSRVLSSVDPIGSRELQERAEWAAELAGMQAI CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC DSDRIPVFVADGGSLEMHFRDGRRQGKEDDEYAERHPPTVWFGRWRMDFDGLRETRASVA CCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHHH QSPAGYLPGLEVSYQGGDCDVHYGEAVPTLEEAVAVAKERESNWHQADD CCCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA