Click here to switch to the map view.

The map label for this gene is 187928680

Identifier: 187928680

GI number: 187928680

Start: 1689194

End: 1689679

Strand: Direct

Name: 187928680

Synonym: Rpic_1597

Alternate gene names: NA

Gene position: 1689194-1689679 (Clockwise)

Preceding gene: 187928679

Following gene: 187928681

Centisome position: 42.85

GC content: 59.88

Gene sequence:

>486_bases
ATGTTTCAAGAACTGGTGCCGCTCGTGAAGGCGAGCGACAAGGTTGTTATCACCCTTTCAATGCAGGGTGACGAGATGAC
CGTGGTCGTCGCGCCGACCGTCAGCAAGCCGGACGACGCAGCCCTGGTTGCGCCGATTGCTCTGACGGCCACGCCGGCGG
AGTTGGATGCTGAGTTTGCCAATGCGATCGGTGGTGTGACGCAGGCCCGCCAGGGTCTCGCCGAACAGGTCGAGTCCACG
AAGGCGGTGATTCAAGCGGCTACCGCTGCTCAGTCGAACAAGGCGACCAAGGCCCTCGCGACATCCAATCGCGCCAATCC
GAAGTTGCCGGCGCCCAAGTCGAAAGGCATGGACGACGACGATGACGATGGTGTGGTCGATGTTGAGGTCACTGAAACGA
CGTCCGGTAGCACGAGTTCGTCAGCTAAAGATGCGCAAGGCGACAAAAAATCGTCTGGCACCTCCCTCGCTGATCTGCTC
GGTTAA

Upstream 100 bases:

>100_bases
TCAAGGTAGACGGGTTTGACTACACGGGCAAGGTGCCCAAGGTCTTGAAGTTCTGACCACGCCTCGCTTCCCCATCCCAT
TCATTTTCAAGGAAATCCCT

Downstream 100 bases:

>100_bases
GGAGAAGCCATGGCTATCACCATCAACACGGTCAAGCGCGAGTTTTCCTACAACGGCATGACGCTTGCCGATCCGGGAAC
GCAGTTCACTCCGGACCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MFQELVPLVKASDKVVITLSMQGDEMTVVVAPTVSKPDDAALVAPIALTATPAELDAEFANAIGGVTQARQGLAEQVEST
KAVIQAATAAQSNKATKALATSNRANPKLPAPKSKGMDDDDDDGVVDVEVTETTSGSTSSSAKDAQGDKKSSGTSLADLL
G

Sequences:

>Translated_161_residues
MFQELVPLVKASDKVVITLSMQGDEMTVVVAPTVSKPDDAALVAPIALTATPAELDAEFANAIGGVTQARQGLAEQVEST
KAVIQAATAAQSNKATKALATSNRANPKLPAPKSKGMDDDDDDGVVDVEVTETTSGSTSSSAKDAQGDKKSSGTSLADLL
G
>Mature_161_residues
MFQELVPLVKASDKVVITLSMQGDEMTVVVAPTVSKPDDAALVAPIALTATPAELDAEFANAIGGVTQARQGLAEQVEST
KAVIQAATAAQSNKATKALATSNRANPKLPAPKSKGMDDDDDDGVVDVEVTETTSGSTSSSAKDAQGDKKSSGTSLADLL
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16343; Mature: 16343

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQELVPLVKASDKVVITLSMQGDEMTVVVAPTVSKPDDAALVAPIALTATPAELDAEFA
CCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHH
NAIGGVTQARQGLAEQVESTKAVIQAATAAQSNKATKALATSNRANPKLPAPKSKGMDDD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DDDGVVDVEVTETTSGSTSSSAKDAQGDKKSSGTSLADLLG
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MFQELVPLVKASDKVVITLSMQGDEMTVVVAPTVSKPDDAALVAPIALTATPAELDAEFA
CCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHH
NAIGGVTQARQGLAEQVESTKAVIQAATAAQSNKATKALATSNRANPKLPAPKSKGMDDD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DDDGVVDVEVTETTSGSTSSSAKDAQGDKKSSGTSLADLLG
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA