Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187928635

Identifier: 187928635

GI number: 187928635

Start: 1642205

End: 1643281

Strand: Direct

Name: 187928635

Synonym: Rpic_1551

Alternate gene names: NA

Gene position: 1642205-1643281 (Clockwise)

Preceding gene: 187928634

Following gene: 187928636

Centisome position: 41.65

GC content: 59.33

Gene sequence:

>1077_bases
ATGAAGAAACTGAGTGAAATAGTGCAAAACTGGACGCCCACTCAATGGGATGCTCTGGTGAACCAATACCTGCCGGCGGC
TTTCCTCACGGAGAGCTTCTGGAAGGGTAGGCCTGGCCCGTGCCCGATCTGTGGTGGGCACGATCGATTTACCTACGACA
ACAAACGTGGTCGCGGCGATTGGGTCTGCCGCAAATGCAACGCTGGTAGCCCCAAAGCCGGAGACGGCATTGAGCTCGTG
TGTCGCGCGACTGGTATGTCGTATCACGAATTGACCTGCAGATTGAACGGCGAACCCGTTCATCCAATCGGTCCCTTGGT
CAATCGGCCGGTCGCCTGTCGGCAAAAGAAGTCAGCCGATCCCGTCTGGAAGAAGCGCCGCATCCATAAGCAGTGGGATG
AAGCAGTGTCTCTCACGCCAGGCGACCACGTGATGCACTACTTGGCCGCACGGGTTCCGGGGCTCCGGGCGCCGCGTCCG
CAATCGTTGCGGGTTGCGATGCAGGACTACCTGTTTGAGGACGAGGTGATCGGCCGTTATCTAACCATCATCGCCAAATT
CACCTTGCCCGATGGCCAGATGGCGACCGTGCATCGAACCTCGTTGGACCCCGTCAAGCCGATGAAGGCGACCATCATCA
GCAAGGACGGGGAGGTATTGCCCGCCAAGCGCAATGACGTGTCGGCGTTGCCGCTCGCCGGCGGCGCGGTGCGGCTGATG
ACGCCTCGTAACGGTGAGATCGGGATCGCGGAAGGGCTGGAGACTTCCTACGCTGCCTACATGCTCTTCGGTGTGCCGAT
GTGGTATTGCCTCAATCGCGTGCTGGTCAGCCAGTTCGTTGTGCCAGAAGGTCTTGGCATCCACACCGTGCACATCTTTG
CCGACTTTGATGCAGTGGATCCAAAGACGGGAAAGTCGCCGGGAATGTCCGATGCCTTGACGCTCGCCAAGCGCTTGCGT
GCGGAAGGCTTCACGGTTGTCATCCATCGGCCGAAGCTGCGCGGTACAGATTTCTGTGACGAGTGGTGTGCTGAATATCA
GTCGCGCGCTGTGCATCACGAGGCGGTTGCCGCCTAA

Upstream 100 bases:

>100_bases
GTCGTGCTGAAAAGACGGTCTGCCCGTGCGGGCCGTCCTTTGAGCAAGCGTTCCCTCGCCTGTCTCAGGCATCGACCAAC
ACTCCACCTGGAGTCATCCC

Downstream 100 bases:

>100_bases
GTTCGTTGCCGCCTTCGGGTGGCATTTTCTCTTTACTTCTGCCCTGTGGGTTCGTCCCACAGGGCGAATTCCCTGGGCGC
ATTCTGGAGTTCGCTATGCC

Product: P4 alpha zinc-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKKLSEIVQNWTPTQWDALVNQYLPAAFLTESFWKGRPGPCPICGGHDRFTYDNKRGRGDWVCRKCNAGSPKAGDGIELV
CRATGMSYHELTCRLNGEPVHPIGPLVNRPVACRQKKSADPVWKKRRIHKQWDEAVSLTPGDHVMHYLAARVPGLRAPRP
QSLRVAMQDYLFEDEVIGRYLTIIAKFTLPDGQMATVHRTSLDPVKPMKATIISKDGEVLPAKRNDVSALPLAGGAVRLM
TPRNGEIGIAEGLETSYAAYMLFGVPMWYCLNRVLVSQFVVPEGLGIHTVHIFADFDAVDPKTGKSPGMSDALTLAKRLR
AEGFTVVIHRPKLRGTDFCDEWCAEYQSRAVHHEAVAA

Sequences:

>Translated_358_residues
MKKLSEIVQNWTPTQWDALVNQYLPAAFLTESFWKGRPGPCPICGGHDRFTYDNKRGRGDWVCRKCNAGSPKAGDGIELV
CRATGMSYHELTCRLNGEPVHPIGPLVNRPVACRQKKSADPVWKKRRIHKQWDEAVSLTPGDHVMHYLAARVPGLRAPRP
QSLRVAMQDYLFEDEVIGRYLTIIAKFTLPDGQMATVHRTSLDPVKPMKATIISKDGEVLPAKRNDVSALPLAGGAVRLM
TPRNGEIGIAEGLETSYAAYMLFGVPMWYCLNRVLVSQFVVPEGLGIHTVHIFADFDAVDPKTGKSPGMSDALTLAKRLR
AEGFTVVIHRPKLRGTDFCDEWCAEYQSRAVHHEAVAA
>Mature_358_residues
MKKLSEIVQNWTPTQWDALVNQYLPAAFLTESFWKGRPGPCPICGGHDRFTYDNKRGRGDWVCRKCNAGSPKAGDGIELV
CRATGMSYHELTCRLNGEPVHPIGPLVNRPVACRQKKSADPVWKKRRIHKQWDEAVSLTPGDHVMHYLAARVPGLRAPRP
QSLRVAMQDYLFEDEVIGRYLTIIAKFTLPDGQMATVHRTSLDPVKPMKATIISKDGEVLPAKRNDVSALPLAGGAVRLM
TPRNGEIGIAEGLETSYAAYMLFGVPMWYCLNRVLVSQFVVPEGLGIHTVHIFADFDAVDPKTGKSPGMSDALTLAKRLR
AEGFTVVIHRPKLRGTDFCDEWCAEYQSRAVHHEAVAA

Specific function: Unknown

COG id: COG4643

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39783; Mature: 39783

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSEIVQNWTPTQWDALVNQYLPAAFLTESFWKGRPGPCPICGGHDRFTYDNKRGRGD
CCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WVCRKCNAGSPKAGDGIELVCRATGMSYHELTCRLNGEPVHPIGPLVNRPVACRQKKSAD
CEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCHHHCCCHHHHCCCCCC
PVWKKRRIHKQWDEAVSLTPGDHVMHYLAARVPGLRAPRPQSLRVAMQDYLFEDEVIGRY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTIIAKFTLPDGQMATVHRTSLDPVKPMKATIISKDGEVLPAKRNDVSALPLAGGAVRLM
HHHHHEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
TPRNGEIGIAEGLETSYAAYMLFGVPMWYCLNRVLVSQFVVPEGLGIHTVHIFADFDAVD
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCC
PKTGKSPGMSDALTLAKRLRAEGFTVVIHRPKLRGTDFCDEWCAEYQSRAVHHEAVAA
CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLSEIVQNWTPTQWDALVNQYLPAAFLTESFWKGRPGPCPICGGHDRFTYDNKRGRGD
CCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
WVCRKCNAGSPKAGDGIELVCRATGMSYHELTCRLNGEPVHPIGPLVNRPVACRQKKSAD
CEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCHHHCCCHHHHCCCCCC
PVWKKRRIHKQWDEAVSLTPGDHVMHYLAARVPGLRAPRPQSLRVAMQDYLFEDEVIGRY
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTIIAKFTLPDGQMATVHRTSLDPVKPMKATIISKDGEVLPAKRNDVSALPLAGGAVRLM
HHHHHEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
TPRNGEIGIAEGLETSYAAYMLFGVPMWYCLNRVLVSQFVVPEGLGIHTVHIFADFDAVD
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCC
PKTGKSPGMSDALTLAKRLRAEGFTVVIHRPKLRGTDFCDEWCAEYQSRAVHHEAVAA
CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA