| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928633
Identifier: 187928633
GI number: 187928633
Start: 1640649
End: 1641416
Strand: Direct
Name: 187928633
Synonym: Rpic_1549
Alternate gene names: NA
Gene position: 1640649-1641416 (Clockwise)
Preceding gene: 187928632
Following gene: 187928634
Centisome position: 41.61
GC content: 60.29
Gene sequence:
>768_bases ATGACGTTCCTCGAATCGCTCGTGAAGGTGCTCCTTCCCAAAGCCGACAACCCTCAGCGTCACGCAGACGCCGAACCCAT CAAGGTTGGTGCTGGCGGCAACAACGAAACACAGATGACCATCAGCGGTGAGCCGCACCTGTTTCGCGATGAAGGTGATC GAGTCGCGCATTTCGTTGCGCTCTTCGAGAGCCGTCTCACCGAGACCCCGTTCGGTCCCAAGCTGCTGCCTGCCTTAATC CCCCATTGGTCTCTCAAAGCAGTCCACGAGGGCTTGAAGGTGACGGAGGTGGTGGCACAGGTCATTCAGGGCGGCGTCCA GCCTTCCTCAGTCAAGCAGGAGCCGACTCGCAGTGCGGCTGCCCCTAGACGGGCAGTGCCCGAAACGACGGAGGAAGCAC CGGTTGAGGCCGATGCGCAGGCCCGCCGCGCACGTGCCCCTGAAGCGCGCTCGCGTGCCACCTATCACGGTCGCATCAAG TCGTGGGGCGAAGAGCGGTTCCCTGATCGCAAACGTCCCGGTAAGTCCTACAAGAATTTTGCGTTGAAGCTCGAAATGGC CTCAGGCATGGAGACGCTGCAGGGCGAAGGCCTGAAGGACGCAATCTCGGAGGCGGGCTGCAAGCTCGGCGACGCAGTTG AGGTCAAACGCCTTCGCAAGATCAAGGTCCCGGCCTTCGATGAAAAGAGTGGTGACCCCGTTCTCGATGAGAACGGCAAC CAAAAGGTTCATGACAAGTGGCTGTGGTCCATCTCCGTAGCCCATTAA
Upstream 100 bases:
>100_bases CCGAAGTCCTGCAGGACGTCATCCTGAACCAGCCTAGGCTGAAGAAGGATCTCGACGAACTGAGGCATTCGTTCTGCGGC ACGCTGTTGTAGGAGGCCGC
Downstream 100 bases:
>100_bases CCAAAAGGTAATTCCGTATGGCTTCAGTCAACAAGGTCATCATCGTGGGCAACCTCGGTGCTGATCCGGAAACACGTTAC ATGCCCAGTGGCGACGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTFLESLVKVLLPKADNPQRHADAEPIKVGAGGNNETQMTISGEPHLFRDEGDRVAHFVALFESRLTETPFGPKLLPALI PHWSLKAVHEGLKVTEVVAQVIQGGVQPSSVKQEPTRSAAAPRRAVPETTEEAPVEADAQARRARAPEARSRATYHGRIK SWGEERFPDRKRPGKSYKNFALKLEMASGMETLQGEGLKDAISEAGCKLGDAVEVKRLRKIKVPAFDEKSGDPVLDENGN QKVHDKWLWSISVAH
Sequences:
>Translated_255_residues MTFLESLVKVLLPKADNPQRHADAEPIKVGAGGNNETQMTISGEPHLFRDEGDRVAHFVALFESRLTETPFGPKLLPALI PHWSLKAVHEGLKVTEVVAQVIQGGVQPSSVKQEPTRSAAAPRRAVPETTEEAPVEADAQARRARAPEARSRATYHGRIK SWGEERFPDRKRPGKSYKNFALKLEMASGMETLQGEGLKDAISEAGCKLGDAVEVKRLRKIKVPAFDEKSGDPVLDENGN QKVHDKWLWSISVAH >Mature_254_residues TFLESLVKVLLPKADNPQRHADAEPIKVGAGGNNETQMTISGEPHLFRDEGDRVAHFVALFESRLTETPFGPKLLPALIP HWSLKAVHEGLKVTEVVAQVIQGGVQPSSVKQEPTRSAAAPRRAVPETTEEAPVEADAQARRARAPEARSRATYHGRIKS WGEERFPDRKRPGKSYKNFALKLEMASGMETLQGEGLKDAISEAGCKLGDAVEVKRLRKIKVPAFDEKSGDPVLDENGNQ KVHDKWLWSISVAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28076; Mature: 27945
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLESLVKVLLPKADNPQRHADAEPIKVGAGGNNETQMTISGEPHLFRDEGDRVAHFVA CHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEECCCCHHHHHHHH LFESRLTETPFGPKLLPALIPHWSLKAVHEGLKVTEVVAQVIQGGVQPSSVKQEPTRSAA HHHHHHCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHC APRRAVPETTEEAPVEADAQARRARAPEARSRATYHGRIKSWGEERFPDRKRPGKSYKNF CCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHHHHHHCCHHHCCCCCCCCCCHHCE ALKLEMASGMETLQGEGLKDAISEAGCKLGDAVEVKRLRKIKVPAFDEKSGDPVLDENGN EEEEEHHHCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QKVHDKWLWSISVAH CCCCHHEEEEEEECC >Mature Secondary Structure TFLESLVKVLLPKADNPQRHADAEPIKVGAGGNNETQMTISGEPHLFRDEGDRVAHFVA HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCEECCCCHHHHHHHH LFESRLTETPFGPKLLPALIPHWSLKAVHEGLKVTEVVAQVIQGGVQPSSVKQEPTRSAA HHHHHHCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHC APRRAVPETTEEAPVEADAQARRARAPEARSRATYHGRIKSWGEERFPDRKRPGKSYKNF CCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCHHHHHHHHCCHHHCCCCCCCCCCHHCE ALKLEMASGMETLQGEGLKDAISEAGCKLGDAVEVKRLRKIKVPAFDEKSGDPVLDENGN EEEEEHHHCHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QKVHDKWLWSISVAH CCCCHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA