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The map label for this gene is iagB [H]

Identifier: 187928615

GI number: 187928615

Start: 1623970

End: 1624446

Strand: Direct

Name: iagB [H]

Synonym: Rpic_1531

Alternate gene names: 187928615

Gene position: 1623970-1624446 (Clockwise)

Preceding gene: 187928614

Following gene: 187928616

Centisome position: 41.19

GC content: 60.8

Gene sequence:

>477_bases
ATGAGCGGATCACGACTCCGAGTGCGAGACGTGAGCGGTGCGAAAAGGCTGTTCGCTTTTTTCGCACTTCTGCTGGCTCT
TGCCAGTTTAGCGCGGGCGGATTGTCTCGACGACGCGGCCAATTACTACCGGCTCGATCCGACGCTCGTTCGCGCCATCG
CGTGGCACGAGTCCGGCATGCGGCCGCTTGCTGTCAATCGCAACTCTAACGGCAGTGTTGACGTTGGCCTCATGCAGATC
AACTCCTCCTGGTTTCCGACGCTGGCGCGTGTGGGCATTGCCCCTGAGCACTTGTGGAATCCCTGTGTTAACGCCTACGT
CGGGGCGTGGATTCTGAGCTCGAACATCGCGCGCCTGGGGCCGAACTGGAAAGCCGTCGGCGCATACAACGCCACTTCAC
CGGACAAGCAGTTGCGCTACGCCAACCAAATCTACGCGCGCTGGCAGGCATTGCAGCGCGCTGGTGCCAGTCATTGA

Upstream 100 bases:

>100_bases
ACGGAATCGCTGAGCGCTTGACTGTGGTGGCCGACGGCCGCTCAGTGATCGTGGAACGTGTCCCTGAAGTGCGCTTCTAC
GAGCGCAAGGCGAGGGTGGA

Downstream 100 bases:

>100_bases
CACATTGCGAGACCGTTATGAGAAGCCTTCTTTCCCACAAGCGCATGGCCGTCATCGCGATGGCTGCATGCACCTTCGTT
TCCTCCGTCCACGCGGGGAC

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSGSRLRVRDVSGAKRLFAFFALLLALASLARADCLDDAANYYRLDPTLVRAIAWHESGMRPLAVNRNSNGSVDVGLMQI
NSSWFPTLARVGIAPEHLWNPCVNAYVGAWILSSNIARLGPNWKAVGAYNATSPDKQLRYANQIYARWQALQRAGASH

Sequences:

>Translated_158_residues
MSGSRLRVRDVSGAKRLFAFFALLLALASLARADCLDDAANYYRLDPTLVRAIAWHESGMRPLAVNRNSNGSVDVGLMQI
NSSWFPTLARVGIAPEHLWNPCVNAYVGAWILSSNIARLGPNWKAVGAYNATSPDKQLRYANQIYARWQALQRAGASH
>Mature_157_residues
SGSRLRVRDVSGAKRLFAFFALLLALASLARADCLDDAANYYRLDPTLVRAIAWHESGMRPLAVNRNSNGSVDVGLMQIN
SSWFPTLARVGIAPEHLWNPCVNAYVGAWILSSNIARLGPNWKAVGAYNATSPDKQLRYANQIYARWQALQRAGASH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 17415; Mature: 17284

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSRLRVRDVSGAKRLFAFFALLLALASLARADCLDDAANYYRLDPTLVRAIAWHESGM
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCC
RPLAVNRNSNGSVDVGLMQINSSWFPTLARVGIAPEHLWNPCVNAYVGAWILSSNIARLG
CEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PNWKAVGAYNATSPDKQLRYANQIYARWQALQRAGASH
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGSRLRVRDVSGAKRLFAFFALLLALASLARADCLDDAANYYRLDPTLVRAIAWHESGM
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCC
RPLAVNRNSNGSVDVGLMQINSSWFPTLARVGIAPEHLWNPCVNAYVGAWILSSNIARLG
CEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
PNWKAVGAYNATSPDKQLRYANQIYARWQALQRAGASH
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]