Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

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The map label for this gene is 187928594

Identifier: 187928594

GI number: 187928594

Start: 1602990

End: 1604297

Strand: Direct

Name: 187928594

Synonym: Rpic_1510

Alternate gene names: NA

Gene position: 1602990-1604297 (Clockwise)

Preceding gene: 187928593

Following gene: 187928610

Centisome position: 40.66

GC content: 55.96

Gene sequence:

>1308_bases
ATGGCACGCGTACCCGAAGCAAAGAAGGGTTCCCAGATCGCCCTGTTTCAACAACAGGAGGCTCCTGAGCCGTTCAAGAA
GGCGGTTCAAGCGATCCACGTTTCACCGGTAGGTAGTGCGCTGTCGCTCCAGCAGCGCCGCATCTTCAATGCACTGATCA
AGAACGCCATCGAGCAACGCCTGGCAGGCCGAGAAACAAACAACACGTTTCAGGTCTCTATCCCTCAGATGATGGCAGCG
CTCGACCTCACCACGAAGGACAACGCATACATCAAAGAGACCGCAAAATCGTTGATGCGCACTGTCGTGGATTGGGATCA
GCTCAATAGCGACGGCACGTCGACATGGACGGGTTCAACACTCATTGCCGGCGCCAAGATTGTGGGCTCCGTCTTGTCGT
ATTCGTTCGCTCCGCAGATCAGTGAGGAGCTACTGGATCCCCAACGGTACGCAATGATCGACATGCGGATCGCCAAGCTG
TTCCGGCGGTCCTATTCGCTTGCGTTGTGGGAGAACACTGTACGGTTCGAACGGATAGGCCTGACCGCACGTATCCCACT
GGCCACCTTTCGCAATCTCATACTCGGACGCGAAGAGAGCGAGACCAAATACAAGGAATACAAGATCTTCAAGCGAGCGG
TGTTGACGCCGAGTATTGCCGAAATCAATGATGTATCAGACCATGAGATCGAGTTGATCGAGCACAAGGTCGGCCGAACC
GTCGGTGAGATTCAATTCAAGATCAGTCGCAAAGTGAGCGCACTGGAGGAGGAGCCTCACCAAGACCTAGTCAACACAGT
GGTCAAGTTCGGTGTCCCGCATTCCGAGGCCAAGCGCCTCGTTCGCACGTTCGGAGCCGAACGCATCCTGGAGGCAATCA
GCTACACGCGCGCTCGACAAGCGAAGAAGGGTGTTCCGCCGTTGGATAACATCCCGGCGTACTTTCGCAAGTCGCTTACG
GAGGATTGGGGCAAGGGCGCGGGCAAGGCTGAGTCTGCCGGAGCTGGTCAACAGCAGCAGAAGCCGTTGGCACGAAGCCC
AAAGAATGAAGAGGATGCGCGGGCGCAATACCTCGCAGCTCGCATTCCGCATGCGCAGGGCTACTTTGGGGAACTATCCG
CTGACGATCAGTCGGCGATGCTCTCGCGTTACAACGATCAGTGTTCTGTGAAGGAGTTGAAGGTCGTCGCAGGCAAGAAG
CCCTCCAAGGCAGCGGAATCGAATTTTTTCGAATGGGTGGCACACGAAACTTGGGGCGAACCCAATGCCGGCGAAATTCT
GAACTTCGTGCTGTCGGGAAAAGTCTAG

Upstream 100 bases:

>100_bases
AGCGCTGTCCCTTCCTGGCAACGTAAGATTGCCAAACGAGCGCTATAGGTGAAAAATCTACCCCTAGTTTTTCACCTATA
GCGAACCCACCCACTAGGTC

Downstream 100 bases:

>100_bases
CTGATTATTTCGACACACCGGCTTCAAGAACGAATCGAGAGGTTGGATTCTTCTTCGCCGTGCTCATCTCAAGACGGTCG
CGCGCACGGGTCATGGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Replication Protein; Plasmid Replication Protein; Plasmid Replication Initiation Protein

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAA
LDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKL
FRRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT
VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLT
EDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKK
PSKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV

Sequences:

>Translated_435_residues
MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAA
LDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKL
FRRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT
VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLT
EDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKK
PSKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV
>Mature_434_residues
ARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQRLAGRETNNTFQVSIPQMMAAL
DLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGSTLIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLF
RRSYSLALWENTVRFERIGLTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRTV
GEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQAKKGVPPLDNIPAYFRKSLTE
DWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAARIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKP
SKAAESNFFEWVAHETWGEPNAGEILNFVLSGKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48565; Mature: 48434

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQR
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGRETNNTFQVSIPQMMAALDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGST
HCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLFRRSYSLALWENTVRFERIG
HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT
CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCH
VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKGVPPLDNIPAYFRKSLTEDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAA
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH
RIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKPSKAAESNFFEWVAHETWGE
HCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PNAGEILNFVLSGKV
CCHHHHHHHHHCCCC
>Mature Secondary Structure 
ARVPEAKKGSQIALFQQQEAPEPFKKAVQAIHVSPVGSALSLQQRRIFNALIKNAIEQR
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGRETNNTFQVSIPQMMAALDLTTKDNAYIKETAKSLMRTVVDWDQLNSDGTSTWTGST
HCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LIAGAKIVGSVLSYSFAPQISEELLDPQRYAMIDMRIAKLFRRSYSLALWENTVRFERIG
HHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LTARIPLATFRNLILGREESETKYKEYKIFKRAVLTPSIAEINDVSDHEIELIEHKVGRT
CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCH
VGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKRLVRTFGAERILEAISYTRARQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKGVPPLDNIPAYFRKSLTEDWGKGAGKAESAGAGQQQQKPLARSPKNEEDARAQYLAA
HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH
RIPHAQGYFGELSADDQSAMLSRYNDQCSVKELKVVAGKKPSKAAESNFFEWVAHETWGE
HCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PNAGEILNFVLSGKV
CCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA