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The map label for this gene is 187928579

Identifier: 187928579

GI number: 187928579

Start: 1584708

End: 1586681

Strand: Reverse

Name: 187928579

Synonym: Rpic_1495

Alternate gene names: NA

Gene position: 1586681-1584708 (Counterclockwise)

Preceding gene: 187928580

Following gene: 187928578

Centisome position: 40.24

GC content: 61.4

Gene sequence:

>1974_bases
ATGCGCCGCAAACCGGAGCTCCAGCATCTCGACCTCGCGTCCTGGCCGTCAGTTGCATGGACGGAGCTCACGGAGGGGCG
TCAGCAGCGGGTACGCATGGCGACTGCCGCCATCGAGCGCTATGCACGAGGCGACGCTATCGACGAAATTGAACTGTCCA
CCGGTATCGATCGTCGCCAACTATATCGGTGGTTGTATCGTGCGTTGCAGACACACCCCGATGGACGGATCTGGGGCTTT
CGCGCCGTCATTCCCAATGTGCGGATTGCCGAATACGCGCGCGTTGCCCCTATCGTCGTCCAGGGGCAGACCGGCAGTCG
CGGTACGGCCGGGGCGATATCGCAAATCTTCGAGAGCCATCCCGCCTTGGTGACGTGGCTTCGGGCTCAGATTCGGCAAC
GCAAGGTCGTGCTGCATCAGGTCAGCACGGATGGCAAGCTCAAGACGCGCCTGCGCGGCCTGAAAGCCCTGCATGAGGAG
TTCCTGAAGCAATGTCGGTCGCTCGGTCTGAAGGCGACGGACTACCCGCTCTGTATGGACTATTTGGCAATCCGCTCGTT
GTCCAACCGGCTCAAGGCGGAAATGCTGCGCTCCTTCGGCCAAGCTGCGCGCGCGGCGGGCGCCTCTCACCTCAAAGGCT
TGCCCCTGCAGGACGGACATGCCGTATCGCCCGCGGCCGTGCGCCCCTATCAGGTCGTGGAATTCGACGGGCACCGTCTG
GATGTTCGGCTCAAGGTGGTGGTACGTGACCCTTTGGGTTTTGAGCACGAGTTCGAAATGGAGCGCATCTGGCTGCTGGT
CATCATCGACGTTTGCACTCGCGCGATCCTGGGTTATCACGTCGTGCTCGCGCGCGAGTACAGCCGTCATGACGTGATCA
AGACGATGGAGAAGGCACTGGAGCCTCATCGCCCCATGACCTTCACCCTTCCCAATCTCGCGTACTCCAAGCACGATGGC
CTGCCGTCGCAAAAACTGCCCGAGCTCGCCTACGCTTGCTGGGAGTGGATCAAGCTCGACAACGCCAAAGCAAATCTTGC
CAACGACACGCTCAGTGCCTTGTGCGAGTTCGTGGGTTGCATTGTCGATGCGGGCCCTTATCACCACCCGGACGAGCGCC
CCTACATTGAGCGTTTCTTTGCGACCATTGCGCAAGAGATGTCGTCGCGTCTGCCTGGCTACACCGGATCGCATCCGCGT
GACCTTCGGCGTGCGCTGTCCGATCCGAAGGGCAATCTCCGCTTGTACCTGTCCTCCGATGAGCTGACGGAACTCGTCGA
ATATGCCATCGCCAGTTACAACGGTACACCGCACAGCGGGCTGAACAACATCACGCCTCTGGAGGCCATGGAGCGGTTGA
TCCGTGTCAAGCAGAGCATGCTCTCCTGGTTGGCCGAGCATCGGCGTCGCACGCTGTGCCTGATGCAAACCGCGTCGAGG
CACACGGTGCGTGCCTACTTGCACCAAGGTGTGCGTCCTCACATCAACCTGCACGGTGTGCGCTACACCAGCACAACCCT
GGCAGCGGCGACGCATCTGATCGGTACGAAGCTGCTTGTCTATTCCAACGTCGAAGACCTGCGCGGCGTACGGGCGTTTC
TCGCGGATGGAGCCGAGTTGGGGCCATTGCAGGCGCAGGGCGCGTGGGGCCTGGTGCCCCACGATTTGCGGCTGCGCAAA
GAGATCCTGAAATGGCGTAAGAAGCGCGGCATGCGCAAAGGGATGGAAGGCAACGTGATCGAGGCGTTCGTCCAAGAGAA
GCTGGCGCACGCCAAACACACACGCAAAGCCGCCACGGATCTCGCGCACGTCATCCGTGTTTTGTCGACTGCGCCGACGA
TCTACACGCCTTTGCGACCCACCGTACCCATTTCTGCGCCGCTTTCCAATGCCGTCGCTGACGATTCACCATCGCCGCCG
CCAGCGCCCGGTGTACCACGCCGCCTCACGATTGGTACGGGACTGATTTCCTAG

Upstream 100 bases:

>100_bases
TGTATGAGTTATTGCGCACGGGCAAGCTCTCGGCACCGACCTTGCATACGGAAGCGTTGTCGCTGCTCACACTGTTCTCG
GCACCGGGAGGACAGTCCTG

Downstream 100 bases:

>100_bases
GCGGGCCGCCCGCAAGGAGGACCACCATGTCTGTCGAACGCCCCCGCCCGGTTGATCCGGCTACGCACCCTCTGGTCACT
GGCAATTACCGGATCGCCAC

Product: Integrase catalytic subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MRRKPELQHLDLASWPSVAWTELTEGRQQRVRMATAAIERYARGDAIDEIELSTGIDRRQLYRWLYRALQTHPDGRIWGF
RAVIPNVRIAEYARVAPIVVQGQTGSRGTAGAISQIFESHPALVTWLRAQIRQRKVVLHQVSTDGKLKTRLRGLKALHEE
FLKQCRSLGLKATDYPLCMDYLAIRSLSNRLKAEMLRSFGQAARAAGASHLKGLPLQDGHAVSPAAVRPYQVVEFDGHRL
DVRLKVVVRDPLGFEHEFEMERIWLLVIIDVCTRAILGYHVVLAREYSRHDVIKTMEKALEPHRPMTFTLPNLAYSKHDG
LPSQKLPELAYACWEWIKLDNAKANLANDTLSALCEFVGCIVDAGPYHHPDERPYIERFFATIAQEMSSRLPGYTGSHPR
DLRRALSDPKGNLRLYLSSDELTELVEYAIASYNGTPHSGLNNITPLEAMERLIRVKQSMLSWLAEHRRRTLCLMQTASR
HTVRAYLHQGVRPHINLHGVRYTSTTLAAATHLIGTKLLVYSNVEDLRGVRAFLADGAELGPLQAQGAWGLVPHDLRLRK
EILKWRKKRGMRKGMEGNVIEAFVQEKLAHAKHTRKAATDLAHVIRVLSTAPTIYTPLRPTVPISAPLSNAVADDSPSPP
PAPGVPRRLTIGTGLIS

Sequences:

>Translated_657_residues
MRRKPELQHLDLASWPSVAWTELTEGRQQRVRMATAAIERYARGDAIDEIELSTGIDRRQLYRWLYRALQTHPDGRIWGF
RAVIPNVRIAEYARVAPIVVQGQTGSRGTAGAISQIFESHPALVTWLRAQIRQRKVVLHQVSTDGKLKTRLRGLKALHEE
FLKQCRSLGLKATDYPLCMDYLAIRSLSNRLKAEMLRSFGQAARAAGASHLKGLPLQDGHAVSPAAVRPYQVVEFDGHRL
DVRLKVVVRDPLGFEHEFEMERIWLLVIIDVCTRAILGYHVVLAREYSRHDVIKTMEKALEPHRPMTFTLPNLAYSKHDG
LPSQKLPELAYACWEWIKLDNAKANLANDTLSALCEFVGCIVDAGPYHHPDERPYIERFFATIAQEMSSRLPGYTGSHPR
DLRRALSDPKGNLRLYLSSDELTELVEYAIASYNGTPHSGLNNITPLEAMERLIRVKQSMLSWLAEHRRRTLCLMQTASR
HTVRAYLHQGVRPHINLHGVRYTSTTLAAATHLIGTKLLVYSNVEDLRGVRAFLADGAELGPLQAQGAWGLVPHDLRLRK
EILKWRKKRGMRKGMEGNVIEAFVQEKLAHAKHTRKAATDLAHVIRVLSTAPTIYTPLRPTVPISAPLSNAVADDSPSPP
PAPGVPRRLTIGTGLIS
>Mature_657_residues
MRRKPELQHLDLASWPSVAWTELTEGRQQRVRMATAAIERYARGDAIDEIELSTGIDRRQLYRWLYRALQTHPDGRIWGF
RAVIPNVRIAEYARVAPIVVQGQTGSRGTAGAISQIFESHPALVTWLRAQIRQRKVVLHQVSTDGKLKTRLRGLKALHEE
FLKQCRSLGLKATDYPLCMDYLAIRSLSNRLKAEMLRSFGQAARAAGASHLKGLPLQDGHAVSPAAVRPYQVVEFDGHRL
DVRLKVVVRDPLGFEHEFEMERIWLLVIIDVCTRAILGYHVVLAREYSRHDVIKTMEKALEPHRPMTFTLPNLAYSKHDG
LPSQKLPELAYACWEWIKLDNAKANLANDTLSALCEFVGCIVDAGPYHHPDERPYIERFFATIAQEMSSRLPGYTGSHPR
DLRRALSDPKGNLRLYLSSDELTELVEYAIASYNGTPHSGLNNITPLEAMERLIRVKQSMLSWLAEHRRRTLCLMQTASR
HTVRAYLHQGVRPHINLHGVRYTSTTLAAATHLIGTKLLVYSNVEDLRGVRAFLADGAELGPLQAQGAWGLVPHDLRLRK
EILKWRKKRGMRKGMEGNVIEAFVQEKLAHAKHTRKAATDLAHVIRVLSTAPTIYTPLRPTVPISAPLSNAVADDSPSPP
PAPGVPRRLTIGTGLIS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73887; Mature: 73887

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKPELQHLDLASWPSVAWTELTEGRQQRVRMATAAIERYARGDAIDEIELSTGIDRRQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHH
LYRWLYRALQTHPDGRIWGFRAVIPNVRIAEYARVAPIVVQGQTGSRGTAGAISQIFESH
HHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC
PALVTWLRAQIRQRKVVLHQVSTDGKLKTRLRGLKALHEEFLKQCRSLGLKATDYPLCMD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YLAIRSLSNRLKAEMLRSFGQAARAAGASHLKGLPLQDGHAVSPAAVRPYQVVEFDGHRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
DVRLKVVVRDPLGFEHEFEMERIWLLVIIDVCTRAILGYHVVLAREYSRHDVIKTMEKAL
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPHRPMTFTLPNLAYSKHDGLPSQKLPELAYACWEWIKLDNAKANLANDTLSALCEFVGC
CCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IVDAGPYHHPDERPYIERFFATIAQEMSSRLPGYTGSHPRDLRRALSDPKGNLRLYLSSD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCH
ELTELVEYAIASYNGTPHSGLNNITPLEAMERLIRVKQSMLSWLAEHRRRTLCLMQTASR
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVRAYLHQGVRPHINLHGVRYTSTTLAAATHLIGTKLLVYSNVEDLRGVRAFLADGAEL
HHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCC
GPLQAQGAWGLVPHDLRLRKEILKWRKKRGMRKGMEGNVIEAFVQEKLAHAKHTRKAATD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAHVIRVLSTAPTIYTPLRPTVPISAPLSNAVADDSPSPPPAPGVPRRLTIGTGLIS
HHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MRRKPELQHLDLASWPSVAWTELTEGRQQRVRMATAAIERYARGDAIDEIELSTGIDRRQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHH
LYRWLYRALQTHPDGRIWGFRAVIPNVRIAEYARVAPIVVQGQTGSRGTAGAISQIFESH
HHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC
PALVTWLRAQIRQRKVVLHQVSTDGKLKTRLRGLKALHEEFLKQCRSLGLKATDYPLCMD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YLAIRSLSNRLKAEMLRSFGQAARAAGASHLKGLPLQDGHAVSPAAVRPYQVVEFDGHRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEE
DVRLKVVVRDPLGFEHEFEMERIWLLVIIDVCTRAILGYHVVLAREYSRHDVIKTMEKAL
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPHRPMTFTLPNLAYSKHDGLPSQKLPELAYACWEWIKLDNAKANLANDTLSALCEFVGC
CCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IVDAGPYHHPDERPYIERFFATIAQEMSSRLPGYTGSHPRDLRRALSDPKGNLRLYLSSD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECCH
ELTELVEYAIASYNGTPHSGLNNITPLEAMERLIRVKQSMLSWLAEHRRRTLCLMQTASR
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVRAYLHQGVRPHINLHGVRYTSTTLAAATHLIGTKLLVYSNVEDLRGVRAFLADGAEL
HHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCCC
GPLQAQGAWGLVPHDLRLRKEILKWRKKRGMRKGMEGNVIEAFVQEKLAHAKHTRKAATD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAHVIRVLSTAPTIYTPLRPTVPISAPLSNAVADDSPSPPPAPGVPRRLTIGTGLIS
HHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA