Click here to switch to the map view.

The map label for this gene is 187928550

Identifier: 187928550

GI number: 187928550

Start: 1555533

End: 1556633

Strand: Direct

Name: 187928550

Synonym: Rpic_1464

Alternate gene names: NA

Gene position: 1555533-1556633 (Clockwise)

Preceding gene: 187928549

Following gene: 187928551

Centisome position: 39.45

GC content: 62.4

Gene sequence:

>1101_bases
ATGACCAAGGCCCGCCGCCCTGCCATCAGCATCGCGCCCAATCAGCACGCGGACGACTCGCCAACGCTGTCAAAAGGCCA
GCGAGCATTCAACGCGCTGATCAAGCAGATCGAGAATCGGCGCAAGCGGCTGGCGGATTGGGAGGCGGTCACCGTTCAGT
TCCAGCGCCGATATGCCGGCGAGTTCTTGCCGCTGGAGCGCAGCCGCATCGCATTGCAGATCCGCTTTGTGCGCAGCCTG
GACCAGGTCTACGAGCACGATGCCTTCACCAAGGCAGAGCGCCGCAAGATCTGCGCGCTCATCATCGATCTTGCACGAGA
CCTGATCGATGAAGACGCGAGCCTGAAGGCGCTCTACAACAAGTACAGCGGCACAGACTTTGACCGGGAAGCCGCGATGC
AAGCCGCGGAGATGAAGGCAAGGCTGGAGGCCGCACTCGGCGTCGGCCTGGGCGACGACGCGGATGTGCATTCGGAAGAG
GCGCTACTGCAACGCGCCCGCGAGCACCTCGCACAACGGGCTGAGAAAAAGGCCGCCGCCGCAACCAAGCGTGAAGCCCG
CCGGGCCGCGCGGAAGAAATCTTCGAAGCAACTTGCGGCAGAAGCACAGGAGGCAGACGAACAGGCGCAGATCAGCCTGT
CCATCCGCGAGGTCTATCGCAAGCTCGCCAGCGCCCTGCACCCCGACCGTGAAACCGATCCGCAGGAGCGGGACCGCAAG
ACCGGCCTCATGCAGCGCGTCAACGAGGCGTATGACAAGAACAACCTCCTGCAACTGCTGGAATTGCAGCTGGAGCTTGA
GCACATCGACCAGCACTCGATCAACCGGATCAGCGAAGCGCGGCTGACGCACTACAACCAGATCCTGAAAGACCAGGTGC
GGGAGCTTGACCGGCAAATCCATCGCGTCGAGACGACGTTTCGATACACGTACGGGTATCAGCGGTTCGAAGCGCTGCCG
CCGGACGCCGTCTTGCAAAAACTCGACCTCGACATCGCAGCGCTGCGCCAACAGGTGTGCAATATCGAGCAGGACCTTGC
CGCCTTCGACGATTTCCGCGACGTGCGGCGCATGCTGAAATCCCGCTCGACGCTCGACTGA

Upstream 100 bases:

>100_bases
ATCCCGCTCCTGGGCGTCAAGACGACGCTCAGGGCCGGCACCGCCGCCACATCACACACAGATCGGGCTCCCTTAGCGGA
GCCCGCGACATTTCCGCTCC

Downstream 100 bases:

>100_bases
CGGCCTGCTGGGCCGCACGCCGATCCAGCAAAAACGGGCACCCGAAGGTGCCCGTGTCCGATACAGCGATCGGTCGATCA
GAAGCGGTGCTGCAGGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ N-Terminal Domain-Containing Protein; DNAJ Domain Protein; DNAJ-Class Molecular Chaperone; DNAJ-Class Molecular Chaperone Protein

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTKARRPAISIAPNQHADDSPTLSKGQRAFNALIKQIENRRKRLADWEAVTVQFQRRYAGEFLPLERSRIALQIRFVRSL
DQVYEHDAFTKAERRKICALIIDLARDLIDEDASLKALYNKYSGTDFDREAAMQAAEMKARLEAALGVGLGDDADVHSEE
ALLQRAREHLAQRAEKKAAAATKREARRAARKKSSKQLAAEAQEADEQAQISLSIREVYRKLASALHPDRETDPQERDRK
TGLMQRVNEAYDKNNLLQLLELQLELEHIDQHSINRISEARLTHYNQILKDQVRELDRQIHRVETTFRYTYGYQRFEALP
PDAVLQKLDLDIAALRQQVCNIEQDLAAFDDFRDVRRMLKSRSTLD

Sequences:

>Translated_366_residues
MTKARRPAISIAPNQHADDSPTLSKGQRAFNALIKQIENRRKRLADWEAVTVQFQRRYAGEFLPLERSRIALQIRFVRSL
DQVYEHDAFTKAERRKICALIIDLARDLIDEDASLKALYNKYSGTDFDREAAMQAAEMKARLEAALGVGLGDDADVHSEE
ALLQRAREHLAQRAEKKAAAATKREARRAARKKSSKQLAAEAQEADEQAQISLSIREVYRKLASALHPDRETDPQERDRK
TGLMQRVNEAYDKNNLLQLLELQLELEHIDQHSINRISEARLTHYNQILKDQVRELDRQIHRVETTFRYTYGYQRFEALP
PDAVLQKLDLDIAALRQQVCNIEQDLAAFDDFRDVRRMLKSRSTLD
>Mature_365_residues
TKARRPAISIAPNQHADDSPTLSKGQRAFNALIKQIENRRKRLADWEAVTVQFQRRYAGEFLPLERSRIALQIRFVRSLD
QVYEHDAFTKAERRKICALIIDLARDLIDEDASLKALYNKYSGTDFDREAAMQAAEMKARLEAALGVGLGDDADVHSEEA
LLQRAREHLAQRAEKKAAAATKREARRAARKKSSKQLAAEAQEADEQAQISLSIREVYRKLASALHPDRETDPQERDRKT
GLMQRVNEAYDKNNLLQLLELQLELEHIDQHSINRISEARLTHYNQILKDQVRELDRQIHRVETTFRYTYGYQRFEALPP
DAVLQKLDLDIAALRQQVCNIEQDLAAFDDFRDVRRMLKSRSTLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42243; Mature: 42112

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKARRPAISIAPNQHADDSPTLSKGQRAFNALIKQIENRRKRLADWEAVTVQFQRRYAG
CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EFLPLERSRIALQIRFVRSLDQVYEHDAFTKAERRKICALIIDLARDLIDEDASLKALYN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KYSGTDFDREAAMQAAEMKARLEAALGVGLGDDADVHSEEALLQRAREHLAQRAEKKAAA
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATKREARRAARKKSSKQLAAEAQEADEQAQISLSIREVYRKLASALHPDRETDPQERDRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
TGLMQRVNEAYDKNNLLQLLELQLELEHIDQHSINRISEARLTHYNQILKDQVRELDRQI
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRVETTFRYTYGYQRFEALPPDAVLQKLDLDIAALRQQVCNIEQDLAAFDDFRDVRRMLK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SRSTLD
HCCCCC
>Mature Secondary Structure 
TKARRPAISIAPNQHADDSPTLSKGQRAFNALIKQIENRRKRLADWEAVTVQFQRRYAG
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EFLPLERSRIALQIRFVRSLDQVYEHDAFTKAERRKICALIIDLARDLIDEDASLKALYN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KYSGTDFDREAAMQAAEMKARLEAALGVGLGDDADVHSEEALLQRAREHLAQRAEKKAAA
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATKREARRAARKKSSKQLAAEAQEADEQAQISLSIREVYRKLASALHPDRETDPQERDRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
TGLMQRVNEAYDKNNLLQLLELQLELEHIDQHSINRISEARLTHYNQILKDQVRELDRQI
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRVETTFRYTYGYQRFEALPPDAVLQKLDLDIAALRQQVCNIEQDLAAFDDFRDVRRMLK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SRSTLD
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA