Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 187928519

GI number: 187928519

Start: 1520904

End: 1521353

Strand: Reverse

Name: ybgC [C]

Synonym: Rpic_1433

Alternate gene names: 187928519

Gene position: 1521353-1520904 (Counterclockwise)

Preceding gene: 187928520

Following gene: 187928518

Centisome position: 38.59

GC content: 60.67

Gene sequence:

>450_bases
ATGGCGATCGAGGATTTCCGTCACAGCACGCCGCTGCGCGTACGCTGGGCCGAAGTCGATGCGCAGAGCATCGTCTTCAA
CGGCCACTACCTGCTGTACGCGGATGTGTGTATCACCGAATACTGGCGCAGCATCGGCGTGCGGTATCCGGTGGATGTGG
TCGACACCTTTGGCGTGGATTTCTACGTGGTCAAATCCACGCTCGAATACCACGCCTCCGCGCGCTTTGACGACGAGCTG
GACCTGCGCTGCCGGGTGGCGCGCCTCGGCCGTTCCAGCATGCGCTTTATCATCGAGATGTATCGCGCAGACGAACACCT
CGTCACCGGCGAAGTCATCTATGTGTGCGCCCGTCCAGCCACACCCATGGCCACGCAGACCTCCGCGCCGATTCCCGAGA
CGCTGCGCGAACGCATCCTCAATTTTGAAGTTCTGAAGCCTGAAGTGTGA

Upstream 100 bases:

>100_bases
GCTTCGTGCCGGCTGTGGAAGACGCGCACCGCGATGCCGCCGACGCGCTACGCCGAGCCTTCGGCACCGAGACCGAATCC
CTATAACGAGAGGAGACCGC

Downstream 100 bases:

>100_bases
GAACGAAGCATGACCGCCCCTGAATCTGTCCGCCCGCTTGCCGGTGTTGAAGTCGAGCGCTGGGATGCCGTGCGCGAAGA
AGCGCGCGCCATCCGCTACG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Superfamily Protein; GCN5-Related N-Acetyltransferase; Thioesterase; L-Pal System-Associated Acyl-CoA Thioesterase; Thioesterase Superfamily; Acyl-CoA Thioester Hydrolase; L-Pal Cell Envelope Complex Subunit YbgC; Thioesterase-Like Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAIEDFRHSTPLRVRWAEVDAQSIVFNGHYLLYADVCITEYWRSIGVRYPVDVVDTFGVDFYVVKSTLEYHASARFDDEL
DLRCRVARLGRSSMRFIIEMYRADEHLVTGEVIYVCARPATPMATQTSAPIPETLRERILNFEVLKPEV

Sequences:

>Translated_149_residues
MAIEDFRHSTPLRVRWAEVDAQSIVFNGHYLLYADVCITEYWRSIGVRYPVDVVDTFGVDFYVVKSTLEYHASARFDDEL
DLRCRVARLGRSSMRFIIEMYRADEHLVTGEVIYVCARPATPMATQTSAPIPETLRERILNFEVLKPEV
>Mature_148_residues
AIEDFRHSTPLRVRWAEVDAQSIVFNGHYLLYADVCITEYWRSIGVRYPVDVVDTFGVDFYVVKSTLEYHASARFDDELD
LRCRVARLGRSSMRFIIEMYRADEHLVTGEVIYVCARPATPMATQTSAPIPETLRERILNFEVLKPEV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17266; Mature: 17135

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEDFRHSTPLRVRWAEVDAQSIVFNGHYLLYADVCITEYWRSIGVRYPVDVVDTFGVD
CCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCE
FYVVKSTLEYHASARFDDELDLRCRVARLGRSSMRFIIEMYRADEHLVTGEVIYVCARPA
EEEEHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEECEEEEEEECCC
TPMATQTSAPIPETLRERILNFEVLKPEV
CCCCCCCCCCCHHHHHHHHCCEEEECCCC
>Mature Secondary Structure 
AIEDFRHSTPLRVRWAEVDAQSIVFNGHYLLYADVCITEYWRSIGVRYPVDVVDTFGVD
CCCCCCCCCCCEEEEEECCCEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCE
FYVVKSTLEYHASARFDDELDLRCRVARLGRSSMRFIIEMYRADEHLVTGEVIYVCARPA
EEEEHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEECEEEEEEECCC
TPMATQTSAPIPETLRERILNFEVLKPEV
CCCCCCCCCCCHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA