Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187928490

Identifier: 187928490

GI number: 187928490

Start: 1494246

End: 1494554

Strand: Reverse

Name: 187928490

Synonym: Rpic_1404

Alternate gene names: NA

Gene position: 1494554-1494246 (Counterclockwise)

Preceding gene: 187928491

Following gene: 187928489

Centisome position: 37.91

GC content: 56.31

Gene sequence:

>309_bases
ATGGGTCCCTTTTCTGAGTTCGATCCGGTGCGTGCTGCGGTGGGCATGTTCTTCATGGGCGCGAGTTGTTTTTTGACTCT
CATCGTTGGCGTCAATTTTTTCTCGTGGATGGAGGCTCGCGCGGATGCAGCGCGTCGGCGTGCGTCTGTGTGGCGTGAGC
ATTGTCGTTGGGCACGCAGTGATTTCTTGGATGACCTTCGTATGCGCGAAGAGGCCTATCTCGAGCTTGATGGGTCGAAG
TTGGATTTGGCCGATGAGTTCCTGCGTGAGGATTTGCATCAGCTTGGCGGTCTGGCAGGGGCTTGGTGA

Upstream 100 bases:

>100_bases
GTTCTGCGATTGGTGCGACTGCGACGAAGCCTGAGAAGGTTGCGGCGTAACTGCCGCTGTAAGCCCGGGTGTCCGGGTTT
TTTCAGTTTACGGAGTCGTG

Downstream 100 bases:

>100_bases
TGGCTCAGTGCGTGCAAATCGTTAGTGGTCAGTTTCAGCTTGATAGCGCTGCTGCATCGTCGTGCACGGGTTACCTGTTG
CTGACTGCTGATGAGGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MGPFSEFDPVRAAVGMFFMGASCFLTLIVGVNFFSWMEARADAARRRASVWREHCRWARSDFLDDLRMREEAYLELDGSK
LDLADEFLREDLHQLGGLAGAW

Sequences:

>Translated_102_residues
MGPFSEFDPVRAAVGMFFMGASCFLTLIVGVNFFSWMEARADAARRRASVWREHCRWARSDFLDDLRMREEAYLELDGSK
LDLADEFLREDLHQLGGLAGAW
>Mature_101_residues
GPFSEFDPVRAAVGMFFMGASCFLTLIVGVNFFSWMEARADAARRRASVWREHCRWARSDFLDDLRMREEAYLELDGSKL
DLADEFLREDLHQLGGLAGAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11709; Mature: 11578

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPFSEFDPVRAAVGMFFMGASCFLTLIVGVNFFSWMEARADAARRRASVWREHCRWARS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLDDLRMREEAYLELDGSKLDLADEFLREDLHQLGGLAGAW
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GPFSEFDPVRAAVGMFFMGASCFLTLIVGVNFFSWMEARADAARRRASVWREHCRWARS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLDDLRMREEAYLELDGSKLDLADEFLREDLHQLGGLAGAW
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA