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The map label for this gene is yjhB [C]

Identifier: 187928470

GI number: 187928470

Start: 1480034

End: 1481371

Strand: Direct

Name: yjhB [C]

Synonym: Rpic_1383

Alternate gene names: 187928470

Gene position: 1480034-1481371 (Clockwise)

Preceding gene: 187928469

Following gene: 187928472

Centisome position: 37.54

GC content: 64.05

Gene sequence:

>1338_bases
ATGGAAACCCAACAAGCGGTCGCTGCGGGCAAGCCCTGGCATGCAGACCTGACCCCCACGCACTGGCGCGTGCTGACCGG
CAGCTTTCTGGGCTGGATTTTCGACGGCTACGAAGCCTTCGCGCTCGTCGTCGTGCTATTCCCGATGCTGCATTCGCTGC
TCACACCCGCACAGCTGGCGACGCCGGCCCTCTACGCCGGCATCGTCATCGGCGTGACTCTGCTCGGCTGGGGGATCGGC
GGCCTGGTGGGCGGCGTGATGGCGGACTATGTCGGGCGCAAGCGGATGATGCTGTGGTCGATCTTTCTGTACGCGCTGTT
CTCGGGCCTGACCACGTTCTCGCAGACGTTCGTGCAGTTGTGCGCGCTGCGCTTCATCACCGGTCTGGCGATGGGCAGCG
AATGGAGCACGGGCATCTCCCTGCTTGCCGAAACCTGGCCGGAAAAGGCGCGCGCCAAGGGCGCCGGCTTCCTGCAATCC
GGTTTTGGCTGGGGCACGCTGATTGCTGCGCTGATCTGGTTTGGTCTGTCGTCGTCGCTCCCGATGGGCCAGGAAACCTG
GCGGCTGATGTTTGCCCTCGGCGCACTGCCCGCGTTCTTCGTGCTGTACATCCGCCGCGGTGTCGAGGAGTCGGAAAAAT
GGAAGCAGGCCGTGCGTGAAAAGCGCTGGAGCGCCACCGGCGCGGCAGGCAAGGGCGGCAGCGACAAGCGGCCCTTCACG
CTGTCCCAGTTGTTCCGCGAACCGGAGGCTCGTCGCCGTACGTTCGTCACGCTGCTGCTTTCGGTGGTCACCACCGTCGG
CTGGTGGGCGATCTCGAGCTGGCTGCCGACCTTCACCATCGGACTCGCCAAGGAACAAGGTCTGGCCAACCCGGCCGGCT
GGGGCTCGAAGATCACGATTCTTTACACGGTGGGCGCCATTGTTGCCTACATGGCCGCCGGCTTCATCATCGACGCCATT
GGCCGCCGCCGCTTCCTGTTCCTGACGTTCCTGGGCTCATTGGCGACGACCTACGTGACCTACGCGATGACGACCTCGGT
TGAATCGATGTCCGTCGTCGCGCCCATCAACGGCTTCTTCACGCTGGGCTGCGCCTATGTGTGGATGGCGATCTATCCGG
CAGAGCTGTTCGGCTCGACCGTACGCTCGACCGCGTGCAGTTTCGTCTTCAATGCTGCGCGCCTGATCGCCTGGGTGTTC
CCGATCATCGCCGGCTCGTTGATCCACTCGTTCGGTGGCGTCGCCAATGCGGCACTGGCGCTTGGCTCTGTCTACGTCCT
CGGGCTTGTATTGCCGTGGTTCCTGCCGGAAACGCAGGGGGAAGGTCTACCACACTAA

Upstream 100 bases:

>100_bases
CGCGCCGCACCGCGGAACCCTGGCTATTCAACTCACCAGCATAAGCCGGCACAACACACAAAAAGCAGCCGCATATCCCT
ATCTTCCAAAGGAGACAACG

Downstream 100 bases:

>100_bases
GCGCCCATCCCTACGGCACTTTGGCTGCGCGGCGAAATCGCCGCGCTTTTTTTTTGAGAAGAGAAGGGGATTGAGGCCGC
TGCCGACACGCACTGAGGCT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
METQQAVAAGKPWHADLTPTHWRVLTGSFLGWIFDGYEAFALVVVLFPMLHSLLTPAQLATPALYAGIVIGVTLLGWGIG
GLVGGVMADYVGRKRMMLWSIFLYALFSGLTTFSQTFVQLCALRFITGLAMGSEWSTGISLLAETWPEKARAKGAGFLQS
GFGWGTLIAALIWFGLSSSLPMGQETWRLMFALGALPAFFVLYIRRGVEESEKWKQAVREKRWSATGAAGKGGSDKRPFT
LSQLFREPEARRRTFVTLLLSVVTTVGWWAISSWLPTFTIGLAKEQGLANPAGWGSKITILYTVGAIVAYMAAGFIIDAI
GRRRFLFLTFLGSLATTYVTYAMTTSVESMSVVAPINGFFTLGCAYVWMAIYPAELFGSTVRSTACSFVFNAARLIAWVF
PIIAGSLIHSFGGVANAALALGSVYVLGLVLPWFLPETQGEGLPH

Sequences:

>Translated_445_residues
METQQAVAAGKPWHADLTPTHWRVLTGSFLGWIFDGYEAFALVVVLFPMLHSLLTPAQLATPALYAGIVIGVTLLGWGIG
GLVGGVMADYVGRKRMMLWSIFLYALFSGLTTFSQTFVQLCALRFITGLAMGSEWSTGISLLAETWPEKARAKGAGFLQS
GFGWGTLIAALIWFGLSSSLPMGQETWRLMFALGALPAFFVLYIRRGVEESEKWKQAVREKRWSATGAAGKGGSDKRPFT
LSQLFREPEARRRTFVTLLLSVVTTVGWWAISSWLPTFTIGLAKEQGLANPAGWGSKITILYTVGAIVAYMAAGFIIDAI
GRRRFLFLTFLGSLATTYVTYAMTTSVESMSVVAPINGFFTLGCAYVWMAIYPAELFGSTVRSTACSFVFNAARLIAWVF
PIIAGSLIHSFGGVANAALALGSVYVLGLVLPWFLPETQGEGLPH
>Mature_445_residues
METQQAVAAGKPWHADLTPTHWRVLTGSFLGWIFDGYEAFALVVVLFPMLHSLLTPAQLATPALYAGIVIGVTLLGWGIG
GLVGGVMADYVGRKRMMLWSIFLYALFSGLTTFSQTFVQLCALRFITGLAMGSEWSTGISLLAETWPEKARAKGAGFLQS
GFGWGTLIAALIWFGLSSSLPMGQETWRLMFALGALPAFFVLYIRRGVEESEKWKQAVREKRWSATGAAGKGGSDKRPFT
LSQLFREPEARRRTFVTLLLSVVTTVGWWAISSWLPTFTIGLAKEQGLANPAGWGSKITILYTVGAIVAYMAAGFIIDAI
GRRRFLFLTFLGSLATTYVTYAMTTSVESMSVVAPINGFFTLGCAYVWMAIYPAELFGSTVRSTACSFVFNAARLIAWVF
PIIAGSLIHSFGGVANAALALGSVYVLGLVLPWFLPETQGEGLPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI166064021, Length=397, Percent_Identity=22.9219143576826, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI8923870, Length=437, Percent_Identity=24.0274599542334, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87082404, Length=332, Percent_Identity=29.2168674698795, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI87082231, Length=206, Percent_Identity=30.0970873786408, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI87082159, Length=384, Percent_Identity=28.3854166666667, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1786229, Length=446, Percent_Identity=24.8878923766816, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788292, Length=424, Percent_Identity=25.2358490566038, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788068, Length=399, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081723, Length=336, Percent_Identity=24.702380952381, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1790550, Length=444, Percent_Identity=24.0990990990991, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004746
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48319; Mature: 48319

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQQAVAAGKPWHADLTPTHWRVLTGSFLGWIFDGYEAFALVVVLFPMLHSLLTPAQLA
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TPALYAGIVIGVTLLGWGIGGLVGGVMADYVGRKRMMLWSIFLYALFSGLTTFSQTFVQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CALRFITGLAMGSEWSTGISLLAETWPEKARAKGAGFLQSGFGWGTLIAALIWFGLSSSL
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCC
PMGQETWRLMFALGALPAFFVLYIRRGVEESEKWKQAVREKRWSATGAAGKGGSDKRPFT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
LSQLFREPEARRRTFVTLLLSVVTTVGWWAISSWLPTFTIGLAKEQGLANPAGWGSKITI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEH
LYTVGAIVAYMAAGFIIDAIGRRRFLFLTFLGSLATTYVTYAMTTSVESMSVVAPINGFF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHH
TLGCAYVWMAIYPAELFGSTVRSTACSFVFNAARLIAWVFPIIAGSLIHSFGGVANAALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSVYVLGLVLPWFLPETQGEGLPH
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
METQQAVAAGKPWHADLTPTHWRVLTGSFLGWIFDGYEAFALVVVLFPMLHSLLTPAQLA
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TPALYAGIVIGVTLLGWGIGGLVGGVMADYVGRKRMMLWSIFLYALFSGLTTFSQTFVQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CALRFITGLAMGSEWSTGISLLAETWPEKARAKGAGFLQSGFGWGTLIAALIWFGLSSSL
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCC
PMGQETWRLMFALGALPAFFVLYIRRGVEESEKWKQAVREKRWSATGAAGKGGSDKRPFT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
LSQLFREPEARRRTFVTLLLSVVTTVGWWAISSWLPTFTIGLAKEQGLANPAGWGSKITI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEH
LYTVGAIVAYMAAGFIIDAIGRRRFLFLTFLGSLATTYVTYAMTTSVESMSVVAPINGFF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHH
TLGCAYVWMAIYPAELFGSTVRSTACSFVFNAARLIAWVFPIIAGSLIHSFGGVANAALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSVYVLGLVLPWFLPETQGEGLPH
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]