Click here to switch to the map view.

The map label for this gene is 187928461

Identifier: 187928461

GI number: 187928461

Start: 1472595

End: 1473113

Strand: Direct

Name: 187928461

Synonym: Rpic_1374

Alternate gene names: NA

Gene position: 1472595-1473113 (Clockwise)

Preceding gene: 187928460

Following gene: 187928462

Centisome position: 37.35

GC content: 65.51

Gene sequence:

>519_bases
ATGCGGGCGATGCGTTGGCTGGCGGTAGCGATTGTCGTGGCGGCGACGGCAGGATGTGCAGTATTGGAGTCCCCCGTCAC
CAAGGGGCAGCGGCTGGTGGGTGCGGACGAGCCCGCCGTGCAGGCGCAATTCGGGCCGCCGCGCGAAACCTATCCGCTCG
ATGGCGGCACCCGCTGGCTCTATCCGACCAAACCGTACGGGCAGTTCACCTACGCGGCCGACTTTGATGCCGGCGGCAAG
CTCGTCGCCTTCAAGCAAGTCCTGAGCAGCCTCGAGTTTGCCCAGGCCAAGATCGGCGTCTGGACCCGCGATGACGTGCT
GCGGCATTTCGGTCAGCCGGTCGAAACCGCGTATTTCCCACGCATGGACCGGCTGGTCTGGTCGTACCGCTTCAAGGCAG
ACGACGTCTGGCCGTCGCTGATGCATTTCTACTTCGACCCCGCCGGCGTCCTGCAACTGACGCAGATTACGCCCGACCCG
CTTTACGATCCGGACCGCCTCCGGCTGTTCCGCCGCTAG

Upstream 100 bases:

>100_bases
CTGGCCGCGGCCCACGTCGACATCGCACCGCTACTCGCGCGCACTGCTGAAACGCGGCGGTAAACTACGCGCTTCACTCA
GTGCAACAGGGACCATTGTG

Downstream 100 bases:

>100_bases
TTGGGCGGCAGTTGAGGTAGCGCAATCCGATTGTGCGCTCAGGGTTCCTCCTGCATTGCGCGCATTGCGCGGCGACCTAA
GCTAGAGGGCAGGGGAGGCA

Product: putative transmembrane lipoprotein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRAMRWLAVAIVVAATAGCAVLESPVTKGQRLVGADEPAVQAQFGPPRETYPLDGGTRWLYPTKPYGQFTYAADFDAGGK
LVAFKQVLSSLEFAQAKIGVWTRDDVLRHFGQPVETAYFPRMDRLVWSYRFKADDVWPSLMHFYFDPAGVLQLTQITPDP
LYDPDRLRLFRR

Sequences:

>Translated_172_residues
MRAMRWLAVAIVVAATAGCAVLESPVTKGQRLVGADEPAVQAQFGPPRETYPLDGGTRWLYPTKPYGQFTYAADFDAGGK
LVAFKQVLSSLEFAQAKIGVWTRDDVLRHFGQPVETAYFPRMDRLVWSYRFKADDVWPSLMHFYFDPAGVLQLTQITPDP
LYDPDRLRLFRR
>Mature_172_residues
MRAMRWLAVAIVVAATAGCAVLESPVTKGQRLVGADEPAVQAQFGPPRETYPLDGGTRWLYPTKPYGQFTYAADFDAGGK
LVAFKQVLSSLEFAQAKIGVWTRDDVLRHFGQPVETAYFPRMDRLVWSYRFKADDVWPSLMHFYFDPAGVLQLTQITPDP
LYDPDRLRLFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19505; Mature: 19505

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00260 GLUCAGON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMRWLAVAIVVAATAGCAVLESPVTKGQRLVGADEPAVQAQFGPPRETYPLDGGTRWL
CCHHHHHHHHHHHHHHCCHHHHHCHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCEEE
YPTKPYGQFTYAADFDAGGKLVAFKQVLSSLEFAQAKIGVWTRDDVLRHFGQPVETAYFP
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHCC
RMDRLVWSYRFKADDVWPSLMHFYFDPAGVLQLTQITPDPLYDPDRLRLFRR
HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRAMRWLAVAIVVAATAGCAVLESPVTKGQRLVGADEPAVQAQFGPPRETYPLDGGTRWL
CCHHHHHHHHHHHHHHCCHHHHHCHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCEEE
YPTKPYGQFTYAADFDAGGKLVAFKQVLSSLEFAQAKIGVWTRDDVLRHFGQPVETAYFP
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHCC
RMDRLVWSYRFKADDVWPSLMHFYFDPAGVLQLTQITPDPLYDPDRLRLFRR
HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA