| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is fimG [C]
Identifier: 187928431
GI number: 187928431
Start: 1438515
End: 1439462
Strand: Direct
Name: fimG [C]
Synonym: Rpic_1343
Alternate gene names: 187928431
Gene position: 1438515-1439462 (Clockwise)
Preceding gene: 187928430
Following gene: 187928432
Centisome position: 36.49
GC content: 55.27
Gene sequence:
>948_bases ATGATTGTGAAAGGATTGATTCAGCGCTGCACGCAAATGGTGAAAGCCACGGCGTTCGTCGTGTTGGGTTTGGCCATGGT GCCGCACGACGTGGCGGCCTATGAGTATGTCGCCTTTTCCGGCTCGTATGCACTGCCAGGCAGTCTGGCACCCGGAACGG TTGTCGCACGGCGCTTTTATACGCCTACGCAACTCTGTGGTGAGGCTCAATGCAGGCTGTACCATTTCAAACTGATTACC AAAGGAGCCGCCGATGTTTCCCCGCCTAACACGACAGTTTCAACACGGCTAACCGGCTTGGCCATGCAGGTCATCGTGAA TGGAAAACCTCAGATACTTGTGGATCAATGGAAAGATGCTCCAGTTATATTTTCCACGCCGGTTGAAGTGCAGTTGGTCA AAGAGCCATACGTGGAAATCAGCAGTAGCACAGCAAAACGCTTGGTTCACTCATGGTTTTTCACGAAAACAATGACGAGC AATACTCAAAACATTCACTACTTCAGCCTGGGCGATTCCACGCTCACCAGAATTGAAGGAACGTGTTCCGTGCCAAGTCA GACGGTAGACTTGCCGCCAACCATCGTTCGGAAGCTGACCGGTGTCGGTTCAGTGGCCGGGGTGAGCGACTTCCAGATCA AGATCAACAGTTGTCCGAAGGGATACAACCGGGTGGGATACACGCTCGAGCCCATGGGCGGCGTGGCGGATTCACCGGGC GTGCTGCCGCTCTCTGCCGACTCCACCGTCAAAGGCGTGAAGATACGCCTTGCCGACCGTAACGGCGTTGCCGCCCAATT CGGCACGTCGATCAAGGTCGACGATTACAACACGACGACTGGCGGCTCATATGCAATCCCGATGCAGGCCTCGTATCTCC AGACCGAAGCTGCGGTCACTCCCGGCTCGGTAAAGGGCGCTGTCTCGCTGCGGCTGGACTATCAGTAA
Upstream 100 bases:
>100_bases ACCCGGCAGCGCGTAGCAAAGACCAGCGCATTTTGATTGCGCAGCGCGTATTTGCGCCGAAAACCCAGTGGAAAAAACTG AAATGAGGCTTTGGAGATCG
Downstream 100 bases:
>100_bases CGCGGTTGCCCGACGACGGGCAGGGCGAAGGAGGCGCGTTTGCCCCGTCGCCCTTAAGTTGACGGGTTACGCAGCCGATA GTGCTCAGGTAGCCAGCCGC
Product: Fimbrial protein
Products: NA
Alternate protein names: Type-1 Fimbrial Protein A Subunit; Fimbrial Componenet
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MIVKGLIQRCTQMVKATAFVVLGLAMVPHDVAAYEYVAFSGSYALPGSLAPGTVVARRFYTPTQLCGEAQCRLYHFKLIT KGAADVSPPNTTVSTRLTGLAMQVIVNGKPQILVDQWKDAPVIFSTPVEVQLVKEPYVEISSSTAKRLVHSWFFTKTMTS NTQNIHYFSLGDSTLTRIEGTCSVPSQTVDLPPTIVRKLTGVGSVAGVSDFQIKINSCPKGYNRVGYTLEPMGGVADSPG VLPLSADSTVKGVKIRLADRNGVAAQFGTSIKVDDYNTTTGGSYAIPMQASYLQTEAAVTPGSVKGAVSLRLDYQ
Sequences:
>Translated_315_residues MIVKGLIQRCTQMVKATAFVVLGLAMVPHDVAAYEYVAFSGSYALPGSLAPGTVVARRFYTPTQLCGEAQCRLYHFKLIT KGAADVSPPNTTVSTRLTGLAMQVIVNGKPQILVDQWKDAPVIFSTPVEVQLVKEPYVEISSSTAKRLVHSWFFTKTMTS NTQNIHYFSLGDSTLTRIEGTCSVPSQTVDLPPTIVRKLTGVGSVAGVSDFQIKINSCPKGYNRVGYTLEPMGGVADSPG VLPLSADSTVKGVKIRLADRNGVAAQFGTSIKVDDYNTTTGGSYAIPMQASYLQTEAAVTPGSVKGAVSLRLDYQ >Mature_315_residues MIVKGLIQRCTQMVKATAFVVLGLAMVPHDVAAYEYVAFSGSYALPGSLAPGTVVARRFYTPTQLCGEAQCRLYHFKLIT KGAADVSPPNTTVSTRLTGLAMQVIVNGKPQILVDQWKDAPVIFSTPVEVQLVKEPYVEISSSTAKRLVHSWFFTKTMTS NTQNIHYFSLGDSTLTRIEGTCSVPSQTVDLPPTIVRKLTGVGSVAGVSDFQIKINSCPKGYNRVGYTLEPMGGVADSPG VLPLSADSTVKGVKIRLADRNGVAAQFGTSIKVDDYNTTTGGSYAIPMQASYLQTEAAVTPGSVKGAVSLRLDYQ
Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33711; Mature: 33711
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKGLIQRCTQMVKATAFVVLGLAMVPHDVAAYEYVAFSGSYALPGSLAPGTVVARRFY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHCC TPTQLCGEAQCRLYHFKLITKGAADVSPPNTTVSTRLTGLAMQVIVNGKPQILVDQWKDA CHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHEEEEEEEECCCCCEEEECCCCC PVIFSTPVEVQLVKEPYVEISSSTAKRLVHSWFFTKTMTSNTQNIHYFSLGDSTLTRIEG CEEEECCCEEEEECCCCEEECCHHHHHHHHHHHHHHEECCCCCEEEEEEECCCEEEEECC TCSVPSQTVDLPPTIVRKLTGVGSVAGVSDFQIKINSCPKGYNRVGYTLEPMGGVADSPG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCC VLPLSADSTVKGVKIRLADRNGVAAQFGTSIKVDDYNTTTGGSYAIPMQASYLQTEAAVT EEEECCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCCCCEEECCCHHHHHHHCCCC PGSVKGAVSLRLDYQ CCCCCEEEEEEEECC >Mature Secondary Structure MIVKGLIQRCTQMVKATAFVVLGLAMVPHDVAAYEYVAFSGSYALPGSLAPGTVVARRFY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHCC TPTQLCGEAQCRLYHFKLITKGAADVSPPNTTVSTRLTGLAMQVIVNGKPQILVDQWKDA CHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHEEEEEEEECCCCCEEEECCCCC PVIFSTPVEVQLVKEPYVEISSSTAKRLVHSWFFTKTMTSNTQNIHYFSLGDSTLTRIEG CEEEECCCEEEEECCCCEEECCHHHHHHHHHHHHHHEECCCCCEEEEEEECCCEEEEECC TCSVPSQTVDLPPTIVRKLTGVGSVAGVSDFQIKINSCPKGYNRVGYTLEPMGGVADSPG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCC VLPLSADSTVKGVKIRLADRNGVAAQFGTSIKVDDYNTTTGGSYAIPMQASYLQTEAAVT EEEECCCCCCCEEEEEEECCCCCEECCCCEEEEECCCCCCCCCEEECCCHHHHHHHCCCC PGSVKGAVSLRLDYQ CCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA