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The map label for this gene is 187928428

Identifier: 187928428

GI number: 187928428

Start: 1433694

End: 1435565

Strand: Reverse

Name: 187928428

Synonym: Rpic_1340

Alternate gene names: NA

Gene position: 1435565-1433694 (Counterclockwise)

Preceding gene: 187928433

Following gene: 187928427

Centisome position: 36.41

GC content: 66.83

Gene sequence:

>1872_bases
ATGCCCTCAAGAATTGAAGATTACGCGTTGATTGGCGATTGTGAAACCGCGGCACTGGTTTCGCGCGACGGCTCCATCGA
TTGGCTGTGCTGGCCTCGGTTCGATTCAGGCGCCTGTTTTGCCGCGCTGCTTGGCACGCCGGACCACGGCCGGTGGCGCA
TCGCTCCGCAAGGCGAGGTCCGCGCCACGCGCCGACGCTACCTGCCTGGCACGCTCGTGCTGGAGACCGTCTTCGAGACC
GACACCGGTTCCGCCAGCGTGACCGACCTGATGACGGCCCGCTTGCCCGGCATCGCCGGCGCACGGGACGACACCTCTGA
GCTCATCCGCATCGTGCGCGGGCTCTCCGGCACCGTCGAAATGCGTATGGACCTTACGCTGCGGTTCGATTACGGCGCGT
CTGTACCGTGGGTCAGCCGCGTGTCCGAAGTCACGGGGGCGCCGCCTGAAGGCAGGTGCGACATGCCCGATTGCGTGCTC
CGGGCCGTGGCCGGGCCCAACATGACGACACTGCGCACCGCCGCCCCAATCCGAGGCGAAAATCTCTCCACCGTAGCGGA
TTTTTCCGTGAGCGAAAGCGAGGCGATGCCCTTCGTGCTGACGTATTCGCCGTCGCACCTGCCCTTGCCCGACTCCATCG
ACGCGCTGGAGGCGCAGGTCGACATCGAGGCACGTTGGCGCGCGTGGTCCGGCCGCTGTCACGGCGCTGGCGAATGGACC
GAAGCAGTGGAACGCTCGCTCATCACCCTCAAGGCGCTGACGTACCACCGCACCGGCGGCGTCGTGGCCGCGCCAACAAC
GTCGCTGCCCGAACAGCTCGGCGGGGTGCGCAACTGGGACTACCGCTACTGCTGGCTGCGCGACGCCACGCTCACGCTGC
TCGCGCTCATGAATGCGGGCTACTACAACGAGGCACGCTCCTGGCGTGAATGGCTCGAACGCGCCATCGCCGGCAGCCCC
GCACAAGTGCAGATCATGTACGGCATTGCCGGCGAACGGCGCCTGGGCGAGTGGACCGTCCCCTGGCTGCCCGGCTACGA
AGGCGCGCAGCCCGTACGCGTGGGCAATGCGGCCGCGCTGCAGCTCCAGCTCGATGTGTACGGCGAGTTGATGGACGCCC
TCTTCATCGCCCGCAAAGGCGGCCTTGACGGGGACGATGCCTCCTGGCGCCTGCAGGTCGCGCTGATGACCCATCTGGAG
AGCGTCTGGCAGACGCCCGACGAAGGCATCTGGGAGATCCGCGGGCCCTCGCGCCATTTCACGCATTCCAAGGTCATGGC
GTGGGTGGCGTTCGACCGCGCCGTCAAAACCATCGAGCAATTCAATGTAGACGGGCCCGTGGAGCGCTGGCGAGCCGTGC
GCGACCGCATCCACGCGGAGGTCTGCGCCCACGGCTACAATGCCGCGCGTGGCTGCTTCGTGCAGAGCTACGGCGGGCAC
GAGCTGGACGCTGCACTTCTCATGCTGCCGCTGGTGGGTTTTCTGCCGGCATCCGACCCGCGCATCCAGGGCACGGTCAA
GGCCATCGAAGAAGACCTGCTCGTCGATGGCCTCGTGCGCCGCTACCGCACCGAAGCCGTGACCGACGGCCTGCCCCAGG
GCGAGGGCGTGTTCCTGGCCTGCAGCTTCTGGTATGTCGACAACCTCGTCATGCAAGGTCGCCAGGACGAAGCCCGCGCG
CTCTTCGCCAAGCTGCTGGCACTGCGCAACGACGTGGGCCTGCTGGCCGAGGAATACGACCCACGCGTGCAACGGCTCGT
TGGCAACTTCCCGCAAGCGTTTTCGCATATCGCGCTGGTCAATTCCGCGCTGGCGCTATCCAAGGCGGCCGATCATGTCA
GCCAGCGCACTGGGGAACCCCCGTGCAGCTGA

Upstream 100 bases:

>100_bases
GGTGAGCCTTTCCGGATCACGCCCAGCGTTGTATTCAAGAAGGATACGGGTGGTTTCATGCATGGTCTCGGCCTCGTTGA
AGTACGTGGAGTGGAGTGCA

Downstream 100 bases:

>100_bases
CGTGCAGCTGACGTCCGGCCGAAGCCGGTAAAATACCGGCCATGACCGAATCGACTGCTTTCAGCCCCATGCCAGACGAC
GCAACCAGTGCTTCCGACAG

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein; Glucoamylase; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGEVRATRRRYLPGTLVLETVFET
DTGSASVTDLMTARLPGIAGARDDTSELIRIVRGLSGTVEMRMDLTLRFDYGASVPWVSRVSEVTGAPPEGRCDMPDCVL
RAVAGPNMTTLRTAAPIRGENLSTVADFSVSESEAMPFVLTYSPSHLPLPDSIDALEAQVDIEARWRAWSGRCHGAGEWT
EAVERSLITLKALTYHRTGGVVAAPTTSLPEQLGGVRNWDYRYCWLRDATLTLLALMNAGYYNEARSWREWLERAIAGSP
AQVQIMYGIAGERRLGEWTVPWLPGYEGAQPVRVGNAAALQLQLDVYGELMDALFIARKGGLDGDDASWRLQVALMTHLE
SVWQTPDEGIWEIRGPSRHFTHSKVMAWVAFDRAVKTIEQFNVDGPVERWRAVRDRIHAEVCAHGYNAARGCFVQSYGGH
ELDAALLMLPLVGFLPASDPRIQGTVKAIEEDLLVDGLVRRYRTEAVTDGLPQGEGVFLACSFWYVDNLVMQGRQDEARA
LFAKLLALRNDVGLLAEEYDPRVQRLVGNFPQAFSHIALVNSALALSKAADHVSQRTGEPPCS

Sequences:

>Translated_623_residues
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGEVRATRRRYLPGTLVLETVFET
DTGSASVTDLMTARLPGIAGARDDTSELIRIVRGLSGTVEMRMDLTLRFDYGASVPWVSRVSEVTGAPPEGRCDMPDCVL
RAVAGPNMTTLRTAAPIRGENLSTVADFSVSESEAMPFVLTYSPSHLPLPDSIDALEAQVDIEARWRAWSGRCHGAGEWT
EAVERSLITLKALTYHRTGGVVAAPTTSLPEQLGGVRNWDYRYCWLRDATLTLLALMNAGYYNEARSWREWLERAIAGSP
AQVQIMYGIAGERRLGEWTVPWLPGYEGAQPVRVGNAAALQLQLDVYGELMDALFIARKGGLDGDDASWRLQVALMTHLE
SVWQTPDEGIWEIRGPSRHFTHSKVMAWVAFDRAVKTIEQFNVDGPVERWRAVRDRIHAEVCAHGYNAARGCFVQSYGGH
ELDAALLMLPLVGFLPASDPRIQGTVKAIEEDLLVDGLVRRYRTEAVTDGLPQGEGVFLACSFWYVDNLVMQGRQDEARA
LFAKLLALRNDVGLLAEEYDPRVQRLVGNFPQAFSHIALVNSALALSKAADHVSQRTGEPPCS
>Mature_622_residues
PSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGEVRATRRRYLPGTLVLETVFETD
TGSASVTDLMTARLPGIAGARDDTSELIRIVRGLSGTVEMRMDLTLRFDYGASVPWVSRVSEVTGAPPEGRCDMPDCVLR
AVAGPNMTTLRTAAPIRGENLSTVADFSVSESEAMPFVLTYSPSHLPLPDSIDALEAQVDIEARWRAWSGRCHGAGEWTE
AVERSLITLKALTYHRTGGVVAAPTTSLPEQLGGVRNWDYRYCWLRDATLTLLALMNAGYYNEARSWREWLERAIAGSPA
QVQIMYGIAGERRLGEWTVPWLPGYEGAQPVRVGNAAALQLQLDVYGELMDALFIARKGGLDGDDASWRLQVALMTHLES
VWQTPDEGIWEIRGPSRHFTHSKVMAWVAFDRAVKTIEQFNVDGPVERWRAVRDRIHAEVCAHGYNAARGCFVQSYGGHE
LDAALLMLPLVGFLPASDPRIQGTVKAIEEDLLVDGLVRRYRTEAVTDGLPQGEGVFLACSFWYVDNLVMQGRQDEARAL
FAKLLALRNDVGLLAEEYDPRVQRLVGNFPQAFSHIALVNSALALSKAADHVSQRTGEPPCS

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68731; Mature: 68599

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGEV
CCCCCCCEEEECCCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCH
RATRRRYLPGTLVLETVFETDTGSASVTDLMTARLPGIAGARDDTSELIRIVRGLSGTVE
HHHHHHCCCCHHEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEE
MRMDLTLRFDYGASVPWVSRVSEVTGAPPEGRCDMPDCVLRAVAGPNMTTLRTAAPIRGE
EEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
NLSTVADFSVSESEAMPFVLTYSPSHLPLPDSIDALEAQVDIEARWRAWSGRCHGAGEWT
CCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEEEEEEEEEECCCCCCCCCHHH
EAVERSLITLKALTYHRTGGVVAAPTTSLPEQLGGVRNWDYRYCWLRDATLTLLALMNAG
HHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCC
YYNEARSWREWLERAIAGSPAQVQIMYGIAGERRLGEWTVPWLPGYEGAQPVRVGNAAAL
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEE
QLQLDVYGELMDALFIARKGGLDGDDASWRLQVALMTHLESVWQTPDEGIWEIRGPSRHF
EEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCC
THSKVMAWVAFDRAVKTIEQFNVDGPVERWRAVRDRIHAEVCAHGYNAARGCFVQSYGGH
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCC
ELDAALLMLPLVGFLPASDPRIQGTVKAIEEDLLVDGLVRRYRTEAVTDGLPQGEGVFLA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
CSFWYVDNLVMQGRQDEARALFAKLLALRNDVGLLAEEYDPRVQRLVGNFPQAFSHIALV
EEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
NSALALSKAADHVSQRTGEPPCS
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSRIEDYALIGDCETAALVSRDGSIDWLCWPRFDSGACFAALLGTPDHGRWRIAPQGEV
CCCCCCEEEECCCCHHHHEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCH
RATRRRYLPGTLVLETVFETDTGSASVTDLMTARLPGIAGARDDTSELIRIVRGLSGTVE
HHHHHHCCCCHHEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEE
MRMDLTLRFDYGASVPWVSRVSEVTGAPPEGRCDMPDCVLRAVAGPNMTTLRTAAPIRGE
EEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
NLSTVADFSVSESEAMPFVLTYSPSHLPLPDSIDALEAQVDIEARWRAWSGRCHGAGEWT
CCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEEEEEEEEEECCCCCCCCCHHH
EAVERSLITLKALTYHRTGGVVAAPTTSLPEQLGGVRNWDYRYCWLRDATLTLLALMNAG
HHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCC
YYNEARSWREWLERAIAGSPAQVQIMYGIAGERRLGEWTVPWLPGYEGAQPVRVGNAAAL
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEEE
QLQLDVYGELMDALFIARKGGLDGDDASWRLQVALMTHLESVWQTPDEGIWEIRGPSRHF
EEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCC
THSKVMAWVAFDRAVKTIEQFNVDGPVERWRAVRDRIHAEVCAHGYNAARGCFVQSYGGH
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCC
ELDAALLMLPLVGFLPASDPRIQGTVKAIEEDLLVDGLVRRYRTEAVTDGLPQGEGVFLA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
CSFWYVDNLVMQGRQDEARALFAKLLALRNDVGLLAEEYDPRVQRLVGNFPQAFSHIALV
EEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
NSALALSKAADHVSQRTGEPPCS
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA