| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928354
Identifier: 187928354
GI number: 187928354
Start: 1353826
End: 1354239
Strand: Reverse
Name: 187928354
Synonym: Rpic_1265
Alternate gene names: NA
Gene position: 1354239-1353826 (Counterclockwise)
Preceding gene: 187928355
Following gene: 187928353
Centisome position: 34.35
GC content: 63.53
Gene sequence:
>414_bases ATGTCCGAACACAATGCCACCGGCACCCGCTTCGGCAAGCTGCGCCAACGCATCATGGGTCTTGATCCAAACACCATCGG TACTGTCTTGTCGCTGTTGCCCACCATCCTGGAGCAGGCGAACAAGACCATCGACAAGTTCAAGAACCGCAAGAAAACAG GCACCGAACCCGCCCGCGAAGAAGGCGCCGCGCCCGACCCGAATACACGCATCGCCGAGCTGGAAGCGGCGATCCTGCAG CAGGCCGAATCCGTCAAGCTGCTGGCCGAGCAGCACGCCATCACCATCGACGCGCTGCGCGACGAAGCCGCGCGGCTGGA GCGCCGCCTCAAGCGCATGACGTGGCTGGCGTCCGTCGGCTTTGCATTGGCGGTTGCCGCGCTCTCCTTTGCCCTGCAAG CCTCTCGACACTGA
Upstream 100 bases:
>100_bases CGCCAAGGTTGGCCTGAACGAGCTGCTGCGCGGCGACTAAGCCCCGGCGCAAGGCATGCCTGCTAGTCTTGCAGGCATGC CAACCACTTCAAGCGCAGCA
Downstream 100 bases:
>100_bases TTGCGAATCCCACCATGACGACCCTGCATGGCATCCCCAATTGCGACACCGTGAAGAAAGCCCGCACGTGGCTCGAATCG AACGGCGTGGTCTACACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSEHNATGTRFGKLRQRIMGLDPNTIGTVLSLLPTILEQANKTIDKFKNRKKTGTEPAREEGAAPDPNTRIAELEAAILQ QAESVKLLAEQHAITIDALRDEAARLERRLKRMTWLASVGFALAVAALSFALQASRH
Sequences:
>Translated_137_residues MSEHNATGTRFGKLRQRIMGLDPNTIGTVLSLLPTILEQANKTIDKFKNRKKTGTEPAREEGAAPDPNTRIAELEAAILQ QAESVKLLAEQHAITIDALRDEAARLERRLKRMTWLASVGFALAVAALSFALQASRH >Mature_136_residues SEHNATGTRFGKLRQRIMGLDPNTIGTVLSLLPTILEQANKTIDKFKNRKKTGTEPAREEGAAPDPNTRIAELEAAILQQ AESVKLLAEQHAITIDALRDEAARLERRLKRMTWLASVGFALAVAALSFALQASRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15071; Mature: 14939
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHNATGTRFGKLRQRIMGLDPNTIGTVLSLLPTILEQANKTIDKFKNRKKTGTEPARE CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EGAAPDPNTRIAELEAAILQQAESVKLLAEQHAITIDALRDEAARLERRLKRMTWLASVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALAVAALSFALQASRH HHHHHHHHHHHHHHCCC >Mature Secondary Structure SEHNATGTRFGKLRQRIMGLDPNTIGTVLSLLPTILEQANKTIDKFKNRKKTGTEPARE CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EGAAPDPNTRIAELEAAILQQAESVKLLAEQHAITIDALRDEAARLERRLKRMTWLASVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALAVAALSFALQASRH HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA