| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is cysW [H]
Identifier: 187928311
GI number: 187928311
Start: 1310380
End: 1311360
Strand: Direct
Name: cysW [H]
Synonym: Rpic_1222
Alternate gene names: 187928311
Gene position: 1310380-1311360 (Clockwise)
Preceding gene: 187928310
Following gene: 187928312
Centisome position: 33.24
GC content: 63.3
Gene sequence:
>981_bases ATGGCCGGTACTGTTTCCCGTCAACTTGGTCAGGCGCCCGCTGTTGGCCGCCGTGGGGCCACCGCAGAATCCGCTTGGGT GCGCGCCACGCTGATCCTCATATCGTTCGTGTTCCTGGCGCTGTTCCTGTTCGTGCCGCTGGCGAGCGTGTTCTACGAGG CGTTCAAGAAAGGCATCGACGTCTACCTTGAAGCGCTGATCGAGCCCGATGCGCTGTCCGCGATTTACCTGACACTGACG GTCGCGGCGATTGCGGTGCCGCTGAACGTGGTGTTTGGCGTAGCCGCGGCGTGGGCGATCGCCAAGTTCGAGTTTCGCGG CAAGAACCTGCTGCTCACGCTGATCGACTTGCCGTTCTCGGTATCGCCCGTCATTGCCGGCCTGATCTACGTGCTGCTGT TCGGCGCGCAGGGCTGGTTCGGGCCTTACCTGTCCGACCACGACTTCAAGGTCATCTTTGCTGTGCCGGGCATCGTGCTG GCCACGGTGTTCGTCACGTTTCCGTTTGTGGCGCGCGAGCTGATTCCGCTCATGCAGGCGCAGGGCAGCGAAGAGGAAGA GGCCGCCATCGTGCTCGGCGCCTCGGGCTGGCAGACGTTCTTTCGCGTGACGCTGCCGAACATCAAGTGGGGCCTGTTGT ACGGCGTGATCCTCTGCAACGCGCGGGCGATGGGCGAGTTTGGCGCGGTGTCGGTGGTGTCTGGCCACATTCGCGGGCTG ACCAACACGATGCCGCTGCACGTGGAAATTCTCTACAACGAATACAACTTTGCGGCCGCGTTTGCCGTGGCGTCGTTGCT GACGTTGCTGGCGCTTGTGACGCTGGCACTGAAGACGCTGGTCGAATGGCGCAGCCGCCGCGAGCTGGCAGACGCAGATG CCGGCGTGGGCGAGGGGCCGGGCCAGCGCGTTACGCAACAAACACCGATTTCGAATTCGCACGTCGCCGTGCAATCTCCG CTCGAAGGGAGCGCAGCATGA
Upstream 100 bases:
>100_bases AACCTGCTGCAGGCCTGGACGCGCCGCCGCGGCAATCGCAACGACACCATCGAGCGCGCCCCTGAACCTTCGACCGCCCA CGCGGCAGCTGGAGCCTGAC
Downstream 100 bases:
>100_bases GCATCCAGGTTCAACACATCACCAAGCGCTTTGGCAACTTCGTTGCCCTCGACGATGTTTCGCTCGACTTCAAGCAGGGC GAACTGACCGCGCTGCTGGG
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MAGTVSRQLGQAPAVGRRGATAESAWVRATLILISFVFLALFLFVPLASVFYEAFKKGIDVYLEALIEPDALSAIYLTLT VAAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFSVSPVIAGLIYVLLFGAQGWFGPYLSDHDFKVIFAVPGIVL ATVFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFFRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGL TNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGPGQRVTQQTPISNSHVAVQSP LEGSAA
Sequences:
>Translated_326_residues MAGTVSRQLGQAPAVGRRGATAESAWVRATLILISFVFLALFLFVPLASVFYEAFKKGIDVYLEALIEPDALSAIYLTLT VAAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFSVSPVIAGLIYVLLFGAQGWFGPYLSDHDFKVIFAVPGIVL ATVFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFFRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGL TNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGPGQRVTQQTPISNSHVAVQSP LEGSAA >Mature_325_residues AGTVSRQLGQAPAVGRRGATAESAWVRATLILISFVFLALFLFVPLASVFYEAFKKGIDVYLEALIEPDALSAIYLTLTV AAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFSVSPVIAGLIYVLLFGAQGWFGPYLSDHDFKVIFAVPGIVLA TVFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFFRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGLT NTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGPGQRVTQQTPISNSHVAVQSPL EGSAA
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=263, Percent_Identity=54.3726235741445, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=38.3495145631068, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786980, Length=230, Percent_Identity=32.6086956521739, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787369, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34959; Mature: 34828
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTVSRQLGQAPAVGRRGATAESAWVRATLILISFVFLALFLFVPLASVFYEAFKKGID CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLEALIEPDALSAIYLTLTVAAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCC VSPVIAGLIYVLLFGAQGWFGPYLSDHDFKVIFAVPGIVLATVFVTFPFVARELIPLMQA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC QGSEEEEAAIVLGASGWQTFFRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGL CCCCCCCCEEEEECCCHHEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCC TNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGP CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQRVTQQTPISNSHVAVQSPLEGSAA CCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure AGTVSRQLGQAPAVGRRGATAESAWVRATLILISFVFLALFLFVPLASVFYEAFKKGID CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLEALIEPDALSAIYLTLTVAAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCC VSPVIAGLIYVLLFGAQGWFGPYLSDHDFKVIFAVPGIVLATVFVTFPFVARELIPLMQA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC QGSEEEEAAIVLGASGWQTFFRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGL CCCCCCCCEEEEECCCHHEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCC TNTMPLHVEILYNEYNFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGP CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GQRVTQQTPISNSHVAVQSPLEGSAA CCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]