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The map label for this gene is 187928308

Identifier: 187928308

GI number: 187928308

Start: 1307777

End: 1308661

Strand: Direct

Name: 187928308

Synonym: Rpic_1219

Alternate gene names: NA

Gene position: 1307777-1308661 (Clockwise)

Preceding gene: 187928307

Following gene: 187928309

Centisome position: 33.17

GC content: 68.25

Gene sequence:

>885_bases
ATGAGCCTGATGCACACCACAGCACTCGCACAATTTCTCGGCACGCTGCCGAGCGCCCCGACGCCGGACCGCCAGTTGTG
GCGCGACGCCGCCGGCCGCGTGCAGGGCCAGTTCTTCCACTGCGCGCTGACCAGCCTGTTTGAACCGGTCTGGCAACTGG
CTGCCGATGGCGCGCTGGCGCCCGCCGGCCACGAAGCGCTGATGCGCACGTGGACGCGCGACGGCGATCTGGGCCTGAAC
CCGTGGAAGGTGTTTTCGCTGGCGTCGGATGACGGCACGCTGGTCGAACTGGACCGCCTGTGCCGGCTGGTGCATACGCT
CAACTATTTTTCCCGCACCGATGCGCGGCGGCTGGTCGTCAATGTGCATGGCCGGTTGCTGGCGGCGGTGGCGGCCGATC
ATGGCAAGGCGTTTCACCGTGCGGTGACGGCGCTTGGGCTGCATCCCGAGCAGTTCGTCATCCAGGTGCCGTCCACGGCC
AATGACGATCTGGGGCTGCTGCTGTTCGTGGTGGACAACTATCGGCGCAACGGTTTTGCTGTGGCGGTGCAGGCATCGGA
CCCGGCGGAAGCCGGCGCGCTGCTCGTGCATGCCCGGCCCGCCTATCTGAAGCTCGATGCACGGCGCGACTGGCGTACAC
GAAACGTGGTGTCGCTGGCCGATTCCGCACGGGAGTTGGGCGTGACGCTGGCCTTGCGGCGGTGCGAACGCCCGAGCGAC
CTGGAGCTGGCCCGCGCTGCCGGTATCGCCTATGTGCAGGGCAGCATCCTGCCCGGCGCGGAGCCCGAGCCGGACGCTGT
GCCCACGCCACTGGTGGTACCGATGGCGCAGGCGCCGCTGGTGCAACAGCAGCAGTGCGCCGCCGGCCTTTCTCTGACGC
AATGA

Upstream 100 bases:

>100_bases
ATCGGCAGCGAAGTGGTTGCGCTGGTGAAGGCGACTGAAGTATCGATCGCCAAACTGTAAGGATGGGGAGGAGACGGCGA
CCCAACAAGGAGCCTCACCC

Downstream 100 bases:

>100_bases
GCACGACCCCATGGCACGCAGCGCACCCGCAACCGCATCGGACGCACCCGCCTGGCAGTGGCCGGCAGACGCCGTCATCC
TGACCGTTCCCGGCTTGCAT

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Signalling Protein EAL; Sensory Transduction Protein Kinase; EAL Domain Protein; Signal Transduction Protein Eal Domain; Signal Protein; Signaling Protein

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSLMHTTALAQFLGTLPSAPTPDRQLWRDAAGRVQGQFFHCALTSLFEPVWQLAADGALAPAGHEALMRTWTRDGDLGLN
PWKVFSLASDDGTLVELDRLCRLVHTLNYFSRTDARRLVVNVHGRLLAAVAADHGKAFHRAVTALGLHPEQFVIQVPSTA
NDDLGLLLFVVDNYRRNGFAVAVQASDPAEAGALLVHARPAYLKLDARRDWRTRNVVSLADSARELGVTLALRRCERPSD
LELARAAGIAYVQGSILPGAEPEPDAVPTPLVVPMAQAPLVQQQQCAAGLSLTQ

Sequences:

>Translated_294_residues
MSLMHTTALAQFLGTLPSAPTPDRQLWRDAAGRVQGQFFHCALTSLFEPVWQLAADGALAPAGHEALMRTWTRDGDLGLN
PWKVFSLASDDGTLVELDRLCRLVHTLNYFSRTDARRLVVNVHGRLLAAVAADHGKAFHRAVTALGLHPEQFVIQVPSTA
NDDLGLLLFVVDNYRRNGFAVAVQASDPAEAGALLVHARPAYLKLDARRDWRTRNVVSLADSARELGVTLALRRCERPSD
LELARAAGIAYVQGSILPGAEPEPDAVPTPLVVPMAQAPLVQQQQCAAGLSLTQ
>Mature_293_residues
SLMHTTALAQFLGTLPSAPTPDRQLWRDAAGRVQGQFFHCALTSLFEPVWQLAADGALAPAGHEALMRTWTRDGDLGLNP
WKVFSLASDDGTLVELDRLCRLVHTLNYFSRTDARRLVVNVHGRLLAAVAADHGKAFHRAVTALGLHPEQFVIQVPSTAN
DDLGLLLFVVDNYRRNGFAVAVQASDPAEAGALLVHARPAYLKLDARRDWRTRNVVSLADSARELGVTLALRRCERPSDL
ELARAAGIAYVQGSILPGAEPEPDAVPTPLVVPMAQAPLVQQQQCAAGLSLTQ

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31857; Mature: 31726

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMHTTALAQFLGTLPSAPTPDRQLWRDAAGRVQGQFFHCALTSLFEPVWQLAADGALA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
PAGHEALMRTWTRDGDLGLNPWKVFSLASDDGTLVELDRLCRLVHTLNYFSRTDARRLVV
CCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEE
NVHGRLLAAVAADHGKAFHRAVTALGLHPEQFVIQVPSTANDDLGLLLFVVDNYRRNGFA
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCEE
VAVQASDPAEAGALLVHARPAYLKLDARRDWRTRNVVSLADSARELGVTLALRRCERPSD
EEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LELARAAGIAYVQGSILPGAEPEPDAVPTPLVVPMAQAPLVQQQQCAAGLSLTQ
CHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLMHTTALAQFLGTLPSAPTPDRQLWRDAAGRVQGQFFHCALTSLFEPVWQLAADGALA
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
PAGHEALMRTWTRDGDLGLNPWKVFSLASDDGTLVELDRLCRLVHTLNYFSRTDARRLVV
CCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEE
NVHGRLLAAVAADHGKAFHRAVTALGLHPEQFVIQVPSTANDDLGLLLFVVDNYRRNGFA
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCEE
VAVQASDPAEAGALLVHARPAYLKLDARRDWRTRNVVSLADSARELGVTLALRRCERPSD
EEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LELARAAGIAYVQGSILPGAEPEPDAVPTPLVVPMAQAPLVQQQQCAAGLSLTQ
CHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA