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The map label for this gene is scpB [H]

Identifier: 187928206

GI number: 187928206

Start: 1187310

End: 1188152

Strand: Direct

Name: scpB [H]

Synonym: Rpic_1113

Alternate gene names: 187928206

Gene position: 1187310-1188152 (Clockwise)

Preceding gene: 187928205

Following gene: 187928207

Centisome position: 30.12

GC content: 63.46

Gene sequence:

>843_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAAACCGCGCTGATCTGCGCGCAGGACCCGTTGCGAGTCAATGACTTGCG
CAAGCTGTTCGACGAAGATGTTTCCGCAGACACCATTCGTGTGCTGCTCGAAGAGCTGCGCCAGGACTGGCTGAATCGCG
GTGTCGAACTGGTTGCACTGGCCTCCGGCTGGCGCCTGCAGAGCCGCCCCGAGATGCGTGTGTATCTCGACCGCCTGCAC
CCGGAAAAACCACCCAAGTACTCGCGCGCGGTGATGGAGACACTTGCGATCATCGCTTACCGCCAGCCGGTCACGCGCGG
CGATATCGAAGACATTCGCGGTGTTACGGTCAACACGCAGGTCATCAAGCAGATTGAAGACCGCGGCTGGATCGAAGTCA
TCGGTCATCGCGACGTGCCTGGTCGCCCTGCGCTGTATGCGACGACCAAGCAGTTTCTCGATGACCTTGGCTTGCGCTCG
CTGGACGAGCTGCCGCCGCTCGAAGATGCCCGCGCCCAGGCGCAGGCCAGCCTGCTGGAGCAGGGCGCCATTGAGTTCGA
GGGCGGCGCAATTGCGGTGGAAGAGCTGACAGCGTTGGTCAACGACGCGCCGGAGGGCGCGGAAAGCGCAGCGGCTTCGG
TGGAGGAACCGGCCGGATCGCCGGTTGCCGAGGCTTCCGTTGTGGTGGCCGGTGAAACGCCGGCGCAGCCTGAGATCGCG
CCGCGCGAGGAACCGGCCCTGGAAACCGAGGCGCAAGCGGTGAGTGCGACCGAGGTTGCGTCAGGGCCTGAACACAAAAC
ACCGGTCGAGTTGCCAGCAGCTCCCGCCAATGAACATTCGTAA

Upstream 100 bases:

>100_bases
CAATAGCAATCAGAAATGCCGCGAGCGTCGCGGCGGGACGACAAACCTCAAGCGTGACGGCGACTGGCCGCGCGCGAGCA
ATGACGAGCCGCTCAACCCG

Downstream 100 bases:

>100_bases
TGCCATGCCCGCCGTGCAGTCGGCGGATGGCTTGAACCCCTAGATTTGAAAGACGTTGTGAGCACCCAGCCAGATTCCAT
GGATACACGTATGCCGGCCG

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNTQEAKIVLETALICAQDPLRVNDLRKLFDEDVSADTIRVLLEELRQDWLNRGVELVALASGWRLQSRPEMRVYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGAIAVEELTALVNDAPEGAESAAASVEEPAGSPVAEASVVVAGETPAQPEIA
PREEPALETEAQAVSATEVASGPEHKTPVELPAAPANEHS

Sequences:

>Translated_280_residues
MNTQEAKIVLETALICAQDPLRVNDLRKLFDEDVSADTIRVLLEELRQDWLNRGVELVALASGWRLQSRPEMRVYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGAIAVEELTALVNDAPEGAESAAASVEEPAGSPVAEASVVVAGETPAQPEIA
PREEPALETEAQAVSATEVASGPEHKTPVELPAAPANEHS
>Mature_280_residues
MNTQEAKIVLETALICAQDPLRVNDLRKLFDEDVSADTIRVLLEELRQDWLNRGVELVALASGWRLQSRPEMRVYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGAIAVEELTALVNDAPEGAESAAASVEEPAGSPVAEASVVVAGETPAQPEIA
PREEPALETEAQAVSATEVASGPEHKTPVELPAAPANEHS

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 30438; Mature: 30438

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQDPLRVNDLRKLFDEDVSADTIRVLLEELRQDWLNRGVELVAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
ASGWRLQSRPEMRVYLDRLHPEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEHHH
VIKQIEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLRSLDELPPLEDARAQAQASLLE
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
QGAIEFEGGAIAVEELTALVNDAPEGAESAAASVEEPAGSPVAEASVVVAGETPAQPEIA
HCCEEECCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
PREEPALETEAQAVSATEVASGPEHKTPVELPAAPANEHS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQDPLRVNDLRKLFDEDVSADTIRVLLEELRQDWLNRGVELVAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
ASGWRLQSRPEMRVYLDRLHPEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEHHH
VIKQIEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLRSLDELPPLEDARAQAQASLLE
HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
QGAIEFEGGAIAVEELTALVNDAPEGAESAAASVEEPAGSPVAEASVVVAGETPAQPEIA
HCCEEECCCEEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
PREEPALETEAQAVSATEVASGPEHKTPVELPAAPANEHS
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]