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The map label for this gene is 187928175

Identifier: 187928175

GI number: 187928175

Start: 1153496

End: 1154470

Strand: Direct

Name: 187928175

Synonym: Rpic_1082

Alternate gene names: NA

Gene position: 1153496-1154470 (Clockwise)

Preceding gene: 187928174

Following gene: 187928176

Centisome position: 29.26

GC content: 61.54

Gene sequence:

>975_bases
ATGTTTGACTGGATCGCCGACACCTTCACGCAAGCGCAGGATGTGCTCTTCCAGCACGTCGTGATGCCGATCACCTATAC
CATCGGCCTGGGTGGTTACGTTGAAGATGCCTACCCCGGCACCGAATGGCTGCTGATGGGGCTGCTGCAGATCGCGGTGC
TGCTGCTGATCTTCCGCCCGCTGGAGCGCTGGCGCCCGGTAGAACCGGTGCAAGATCGCAAGGCCGTGCGTGCCGACATC
TTCTACACGCTGTTCCACCGTCTGGGTTTCTTTCCGCTGTTGCTGTTCTTCACGCTGCACCCGCTGATCGACGCTCTCGA
CGGCAAGTTGCGCTTCTGGGGCTGGGCGCATCTGAACGTGGAAGATTGGTGGCCGGGCGTGACGTCGGTTGCCATCGTCA
GCTTTCTGATCTATCTGGTGTTGTTCGACCTGCTCGACTACTGGTATCACCGTCTGTCGCACAAATTCCATTGGTGGTGG
AACCTGCATTCGCTGCATCACAGTCAGCAGCAGATGACGCTGTGGTCTGATGACCGCAACCACATCCTCGACGATGTGCT
GCGTGGTGCGGTGTTTGCCACTGCGGCGCTGGTTGTTGGGGTGGAACCCTCGCAGTACGTGCTGCTGGTGGCCATTTCGC
AGTTGCTGCAAAGCTTGCAGCACGCCAACGTGCGGCTGCATTTCGGCTGGCTGGGCGATCGGCTGCTGATCTCGCCGCGC
TTCCATCGGCTGCATCACGCCATTGGACTGGGGCATGAGGTGCCGGGCAAGCCTGGTGTGCTCGGCGGCTGCAATTTTGG
CGTGCTGTTCCCATGGTGGGACATGCTGTTCGGCACCGCCATCTTCTCGCCCGAGTACCACGCTACCGGTATCCGCGATC
AACTTCCCTCCCCGCAAGGGCGCTCGCGCGACTACGGGCGCGGCGTGCTGCGTCAGCAGTGGCTTGGCCTCAAGCGCCTG
TTCGGCCGCGCGTAA

Upstream 100 bases:

>100_bases
GGCCTGGAACGCAAGGGTTTCTGCTTCGCCACGCTGCGCGATCATCCGCAGTACCAAGCCTGGTTGGGTGCCCACCCGGC
ACACACAGCGGCCCGCTGAC

Downstream 100 bases:

>100_bases
AGCCCGGGCGGGACGGCGCGCGCGTGATTTCTGCACGCTATGCTAGGCTGTTCGCTCTCTGATTCCCCCATTTCTGCATG
AACGACCTGATTCGCTCATT

Product: fatty acid hydroxylase

Products: NA

Alternate protein names: Transmembrane Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MFDWIADTFTQAQDVLFQHVVMPITYTIGLGGYVEDAYPGTEWLLMGLLQIAVLLLIFRPLERWRPVEPVQDRKAVRADI
FYTLFHRLGFFPLLLFFTLHPLIDALDGKLRFWGWAHLNVEDWWPGVTSVAIVSFLIYLVLFDLLDYWYHRLSHKFHWWW
NLHSLHHSQQQMTLWSDDRNHILDDVLRGAVFATAALVVGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLFGTAIFSPEYHATGIRDQLPSPQGRSRDYGRGVLRQQWLGLKRL
FGRA

Sequences:

>Translated_324_residues
MFDWIADTFTQAQDVLFQHVVMPITYTIGLGGYVEDAYPGTEWLLMGLLQIAVLLLIFRPLERWRPVEPVQDRKAVRADI
FYTLFHRLGFFPLLLFFTLHPLIDALDGKLRFWGWAHLNVEDWWPGVTSVAIVSFLIYLVLFDLLDYWYHRLSHKFHWWW
NLHSLHHSQQQMTLWSDDRNHILDDVLRGAVFATAALVVGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLFGTAIFSPEYHATGIRDQLPSPQGRSRDYGRGVLRQQWLGLKRL
FGRA
>Mature_324_residues
MFDWIADTFTQAQDVLFQHVVMPITYTIGLGGYVEDAYPGTEWLLMGLLQIAVLLLIFRPLERWRPVEPVQDRKAVRADI
FYTLFHRLGFFPLLLFFTLHPLIDALDGKLRFWGWAHLNVEDWWPGVTSVAIVSFLIYLVLFDLLDYWYHRLSHKFHWWW
NLHSLHHSQQQMTLWSDDRNHILDDVLRGAVFATAALVVGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLFGTAIFSPEYHATGIRDQLPSPQGRSRDYGRGVLRQQWLGLKRL
FGRA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37593; Mature: 37593

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDWIADTFTQAQDVLFQHVVMPITYTIGLGGYVEDAYPGTEWLLMGLLQIAVLLLIFRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LERWRPVEPVQDRKAVRADIFYTLFHRLGFFPLLLFFTLHPLIDALDGKLRFWGWAHLNV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
EDWWPGVTSVAIVSFLIYLVLFDLLDYWYHRLSHKFHWWWNLHSLHHSQQQMTLWSDDRN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHEEECCCHH
HILDDVLRGAVFATAALVVGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECHH
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLFGTAIFSPEYHATGIRDQLPSPQG
HHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
RSRDYGRGVLRQQWLGLKRLFGRA
CCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDWIADTFTQAQDVLFQHVVMPITYTIGLGGYVEDAYPGTEWLLMGLLQIAVLLLIFRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LERWRPVEPVQDRKAVRADIFYTLFHRLGFFPLLLFFTLHPLIDALDGKLRFWGWAHLNV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCH
EDWWPGVTSVAIVSFLIYLVLFDLLDYWYHRLSHKFHWWWNLHSLHHSQQQMTLWSDDRN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHEEECCCHH
HILDDVLRGAVFATAALVVGVEPSQYVLLVAISQLLQSLQHANVRLHFGWLGDRLLISPR
HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECHH
FHRLHHAIGLGHEVPGKPGVLGGCNFGVLFPWWDMLFGTAIFSPEYHATGIRDQLPSPQG
HHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
RSRDYGRGVLRQQWLGLKRLFGRA
CCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA