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The map label for this gene is 187928174

Identifier: 187928174

GI number: 187928174

Start: 1152661

End: 1153494

Strand: Direct

Name: 187928174

Synonym: Rpic_1081

Alternate gene names: NA

Gene position: 1152661-1153494 (Clockwise)

Preceding gene: 187928173

Following gene: 187928175

Centisome position: 29.24

GC content: 66.19

Gene sequence:

>834_bases
ATGAAGCCCGGCCTGTCGATGTTGCGCACGGCCGCCGCTGCCACAGCGGCGCTGGGCCTGTGCGCGTTGGCCGCGGCTGC
ACCCGGTGGTGTGAACGCCGGTGCGTGCAAAGGCACCGTTTACCTCACTTTCGACACCGGCAGCATGAGCCAGGCGCAGT
TGATTGCCGATACGCTGCGTCGCCATCGCATCCACGCCACGTTCTTCCTCGCCAACGAAAAGACCATCCACGGCGACAGC
ACGCTGGATGACGGCTGGGCCCCGTATTGGAGATCGCTAGCCGCCGACGGCCACGCCTTCGGTACGCACACCTTCGATCA
CGTCTACTACAAGGGCGAGGCAGGTGCGGGCAAGGTCCGCTTCCGCCCGCAGTTTGGCGAGGAGGGTGGCCGCAATGTCG
TGTGGAGTGAGCCCGAATTCTGTGCGGAGCTCAAACGCAGCGCCGAGCGCTTCAAGGCCATGACCGGTCAGCCGATGGAC
CCGCTGTGGCGTGCGCCGGGTGGTCACTTTTCGGCGACGACAGAGGCTTGGGCGAAGCAATGCGGGTTCGCCCACGTGGC
CTGGGCGCCCGCCGGTTTCCTGGGCGACGAGTTGCCGTCCGAGCGTTATCCGAACGACGCGTTGCTGCAGAAGGCGCTGT
CCAGCTTGCGCGATGGCGACATCACCATGGCGCACCTTGGCATCTGGTCGCGTAGGGATCCGTGGGCGCCGGCTGACCTT
GAGCCGCTGATCACCGGCCTGGAACGCAAGGGTTTCTGCTTCGCCACGCTGCGCGATCATCCGCAGTACCAAGCCTGGTT
GGGTGCCCACCCGGCACACACAGCGGCCCGCTGA

Upstream 100 bases:

>100_bases
ACGTTGCAAGCCGCAAGGTCGTGGAAGAGATCAAGGTCGGGCGATCGCCGCACGGCATTTACTTCCGCACGCGCGCTCCA
CTGAATTGAGCGTCACGACC

Downstream 100 bases:

>100_bases
CATGTTTGACTGGATCGCCGACACCTTCACGCAAGCGCAGGATGTGCTCTTCCAGCACGTCGTGATGCCGATCACCTATA
CCATCGGCCTGGGTGGTTAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Exported Polysaccharide Deacetylase; Lipoprotein Glycoside Hydrolase/Deacetylase; Lipoprotein Putative Polysaccharide Deacetylase; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKPGLSMLRTAAAATAALGLCALAAAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIHATFFLANEKTIHGDS
TLDDGWAPYWRSLAADGHAFGTHTFDHVYYKGEAGAGKVRFRPQFGEEGGRNVVWSEPEFCAELKRSAERFKAMTGQPMD
PLWRAPGGHFSATTEAWAKQCGFAHVAWAPAGFLGDELPSERYPNDALLQKALSSLRDGDITMAHLGIWSRRDPWAPADL
EPLITGLERKGFCFATLRDHPQYQAWLGAHPAHTAAR

Sequences:

>Translated_277_residues
MKPGLSMLRTAAAATAALGLCALAAAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIHATFFLANEKTIHGDS
TLDDGWAPYWRSLAADGHAFGTHTFDHVYYKGEAGAGKVRFRPQFGEEGGRNVVWSEPEFCAELKRSAERFKAMTGQPMD
PLWRAPGGHFSATTEAWAKQCGFAHVAWAPAGFLGDELPSERYPNDALLQKALSSLRDGDITMAHLGIWSRRDPWAPADL
EPLITGLERKGFCFATLRDHPQYQAWLGAHPAHTAAR
>Mature_277_residues
MKPGLSMLRTAAAATAALGLCALAAAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLRRHRIHATFFLANEKTIHGDS
TLDDGWAPYWRSLAADGHAFGTHTFDHVYYKGEAGAGKVRFRPQFGEEGGRNVVWSEPEFCAELKRSAERFKAMTGQPMD
PLWRAPGGHFSATTEAWAKQCGFAHVAWAPAGFLGDELPSERYPNDALLQKALSSLRDGDITMAHLGIWSRRDPWAPADL
EPLITGLERKGFCFATLRDHPQYQAWLGAHPAHTAAR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30078; Mature: 30078

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGLSMLRTAAAATAALGLCALAAAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
RHRIHATFFLANEKTIHGDSTLDDGWAPYWRSLAADGHAFGTHTFDHVYYKGEAGAGKVR
HHEEEEEEEEECCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEE
FRPQFGEEGGRNVVWSEPEFCAELKRSAERFKAMTGQPMDPLWRAPGGHFSATTEAWAKQ
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHH
CGFAHVAWAPAGFLGDELPSERYPNDALLQKALSSLRDGDITMAHLGIWSRRDPWAPADL
CCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCH
EPLITGLERKGFCFATLRDHPQYQAWLGAHPAHTAAR
HHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPGLSMLRTAAAATAALGLCALAAAAPGGVNAGACKGTVYLTFDTGSMSQAQLIADTLR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
RHRIHATFFLANEKTIHGDSTLDDGWAPYWRSLAADGHAFGTHTFDHVYYKGEAGAGKVR
HHEEEEEEEEECCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEE
FRPQFGEEGGRNVVWSEPEFCAELKRSAERFKAMTGQPMDPLWRAPGGHFSATTEAWAKQ
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHH
CGFAHVAWAPAGFLGDELPSERYPNDALLQKALSSLRDGDITMAHLGIWSRRDPWAPADL
CCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCH
EPLITGLERKGFCFATLRDHPQYQAWLGAHPAHTAAR
HHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA