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The map label for this gene is yccA [H]

Identifier: 187928147

GI number: 187928147

Start: 1120431

End: 1121132

Strand: Reverse

Name: yccA [H]

Synonym: Rpic_1054

Alternate gene names: 187928147

Gene position: 1121132-1120431 (Counterclockwise)

Preceding gene: 187928168

Following gene: 187928145

Centisome position: 28.44

GC content: 59.12

Gene sequence:

>702_bases
ATGGACAACCAACTCAACACGTACGGTTTTGGCGCTTCCGGCACCGCCGGCGCGTTGGCCGTCCGCAACCGCGTGCTGCG
CAATACCTATTGGCTGCTCGCGCTTTCCATGATCCCCACCATCCTCGGTGCGTGGATTGGTGTCGCCACCGGATTCAACC
TGATGGGGCGTAACCCGCTGATGGGTTTCGTCATCTTCATGGCAGTGGCCTTTGGCTTCTTCTACGCCATTGAGCGCTTC
AAGAACAGCAGCCTGGGCGTGGCACTGCTGCTCGGCTTCACGTTCTTCATGGGGTTGATGCTGTCGCGGCTGATCGGCAT
GATTCTGGGCTTCTCGAACGGTGCGTCGCTCATCATGACGGCGTTCGGCGGCACGGCGATCATCTTTGGTGTGATGGCGA
CGGTAGCCACGGTCAGCAAGCGCGATTTCTCGGGCCTGGGTAAATGGCTGTTCATGGGCGTGCTGGTGCTGATCGTTGGC
TCGGTGGCCAATATCTGGCTGCAATTGCCGGCGATGATGCTGACGATTTCGGTGCTGGCCATCGCGATCTTCTCCGCCTA
CATCCTGTTCGACGTGCAGCGCATCGTGAACGGCGGCGAGACCAACTACGTAACCGCCACCCTGGCGATCTACCTGGACG
TCTACAATATCTTCACGAACCTGCTGGCGATCCTGGGGATCTTCGGCGGCAATCGTAACTAA

Upstream 100 bases:

>100_bases
TCTCCAAGTAGGGACGGTGTGGCTTGCAAAAGCCCGGTTCGGATGCCACATTCGCTGTATCGTCGTATTGTCTGCAATGT
CATTCACCCAAGGAGTTCGC

Downstream 100 bases:

>100_bases
GCACGCACAGCACGCTGGCAACAGCGCAGCGAAAAAAACCGGCGCCTGGTGCGCCGGTTTTTCTTTGTCCGTGAGACGCG
GAATCGCTCAGATCAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDNQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPLMGFVIFMAVAFGFFYAIERF
KNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMTAFGGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVG
SVANIWLQLPAMMLTISVLAIAIFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN

Sequences:

>Translated_233_residues
MDNQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPLMGFVIFMAVAFGFFYAIERF
KNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMTAFGGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVG
SVANIWLQLPAMMLTISVLAIAIFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN
>Mature_233_residues
MDNQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPLMGFVIFMAVAFGFFYAIERF
KNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMTAFGGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVG
SVANIWLQLPAMMLTISVLAIAIFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=215, Percent_Identity=36.2790697674419, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1787004, Length=129, Percent_Identity=32.5581395348837, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25097; Mature: 25097

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHH
MGFVIFMAVAFGFFYAIERFKNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AFGGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPAMMLTISVLA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDNQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMGRNPL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHH
MGFVIFMAVAFGFFYAIERFKNSSLGVALLLGFTFFMGLMLSRLIGMILGFSNGASLIMT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AFGGTAIIFGVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPAMMLTISVLA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAIFSAYILFDVQRIVNGGETNYVTATLAIYLDVYNIFTNLLAILGIFGGNRN
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]