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The map label for this gene is ytlD [H]

Identifier: 187928137

GI number: 187928137

Start: 1110265

End: 1111056

Strand: Direct

Name: ytlD [H]

Synonym: Rpic_1044

Alternate gene names: 187928137

Gene position: 1110265-1111056 (Clockwise)

Preceding gene: 187928136

Following gene: 187928138

Centisome position: 28.16

GC content: 62.88

Gene sequence:

>792_bases
ATGGCTAACCGTCCGCTTTCTCCATTTGCGCTGCGCACCTGGCAGCTTGGCCTGTTGGTCGTCACGTTGGGTGTGTGGCA
CTTCGCCACGCGCTCGCAGGAAGTCGCGTTCTTCTTTGGGGAACCGCTGATCGTTGCCCAGCGCATCTGGGCGTGGTTCG
TGACCGAAGGCGATATCTATCAGCACCTTGGCGTGACGCTGGCCGAGACGGTGCTGGCATTTGCCATCGGCACGGCCACC
GGCCTGGGTGCGGGGCTGTGGCTGGCGCTGAGCCCGGCTGCCTCGGCGGTGCTTGATCCGTACATCAAGGCCGCCAACTC
GATGCCGCGCGTGATCCTGGCGCCAATCTTTGGCGTGTGGTTCGGACTGGGGATCTGGTCAAAGGTCGCGCTGGCGGTGA
CGCTGGTGTTCTTCATCGTCTTCTTCAACGTCTATCAGGGCGTGAAGGAAGTGAGCCCGGTCGTGCTGGCCAATGCACGC
ATGCTGGGCGCATCGCAGCGGCAGCTGCTGCGCTTCGTCTATCTGCCGAGCGCGACGAGCTGGGTGTTCTCATCGCTGCA
TACGTCAGTGGGCCTGGCCTTCGTCGGGGCGGTGGTGGGCGAGTACCTGGGCTCCGCGCGCGGTGTCGGTTACTTGATCC
TGCAGGCCGAAGGTACGTTCGACATCAACACTGTCTTTGCGGGCATCGTCGTGCTGACGGTCTTTGCGCTGGTCCTGGAC
TGGCTCGTGGGCTTGATGGAAAAACGCCTGATGCGCTGGCAACCGAAGAGCGGCGAGACTGAAAAGCTCTGA

Upstream 100 bases:

>100_bases
ACCTGCACTCGCGCATCTGGGATGTCCTGCGCGAAGAAGTGCTCAAGGGCTATGCGCAGCACCGCCGCGTGGCTTGACCT
GAATCTGAACGATTGCATCC

Downstream 100 bases:

>100_bases
GCGCGCTGACGACGCGAACGTCACATCGACCCTGCCAGGAGCAGGGTCATGCAGCTAGACGGTCGGTCTACTACAATGCG
ATCGGTCATGAGCAAGCACC

Product: binding-protein-dependent transport systems inner membrane component

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MANRPLSPFALRTWQLGLLVVTLGVWHFATRSQEVAFFFGEPLIVAQRIWAWFVTEGDIYQHLGVTLAETVLAFAIGTAT
GLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANAR
MLGASQRQLLRFVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLD
WLVGLMEKRLMRWQPKSGETEKL

Sequences:

>Translated_263_residues
MANRPLSPFALRTWQLGLLVVTLGVWHFATRSQEVAFFFGEPLIVAQRIWAWFVTEGDIYQHLGVTLAETVLAFAIGTAT
GLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANAR
MLGASQRQLLRFVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLD
WLVGLMEKRLMRWQPKSGETEKL
>Mature_262_residues
ANRPLSPFALRTWQLGLLVVTLGVWHFATRSQEVAFFFGEPLIVAQRIWAWFVTEGDIYQHLGVTLAETVLAFAIGTATG
LGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARM
LGASQRQLLRFVYLPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLDW
LVGLMEKRLMRWQPKSGETEKL

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=257, Percent_Identity=29.1828793774319, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87081802, Length=200, Percent_Identity=26.5, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789033, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28684; Mature: 28553

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRPLSPFALRTWQLGLLVVTLGVWHFATRSQEVAFFFGEPLIVAQRIWAWFVTEGDIY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCHHH
QHLGVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCHHH
WVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
WLVGLMEKRLMRWQPKSGETEKL
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANRPLSPFALRTWQLGLLVVTLGVWHFATRSQEVAFFFGEPLIVAQRIWAWFVTEGDIY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCHHH
QHLGVTLAETVLAFAIGTATGLGAGLWLALSPAASAVLDPYIKAANSMPRVILAPIFGVW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGASQRQLLRFVYLPSATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCHHH
WVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTVFALVLD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
WLVGLMEKRLMRWQPKSGETEKL
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]