| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is yuxK [H]
Identifier: 187928072
GI number: 187928072
Start: 1035953
End: 1036342
Strand: Reverse
Name: yuxK [H]
Synonym: Rpic_0979
Alternate gene names: 187928072
Gene position: 1036342-1035953 (Counterclockwise)
Preceding gene: 187928073
Following gene: 187928069
Centisome position: 26.29
GC content: 65.38
Gene sequence:
>390_bases ATGATCGTCGTCTACGATGCGCACTGCCTGCTGTGCAGCGGCTCCATCCAGTTTCTGCTGCGGCATGACCGGCAAGGGTT GCTGCGCTTCGCGTCCATGCAGGGTCAAACTGGGCGGCAGCTGCTCGCGCAGGCCGGCGTGAATCCGGATGACGTGGATA CCGTGCTCTTCGTGCGAGACGGCCGTGCGTGGCGTGAAAGCGCGGCCGTCCTGCGCATCCTGCATGCGCTTGGCTGGCCG TGGCGCTTGGCCTGGATCGGCTGGTTGATCCCCGCAACGCTGCGCGACGCGTTGTATCGCCGCGTTGCACGCAATCGCTA TCGATGGTTTGGGCGGTCAGACACCTGCATTCTGCCGCCGCCCGGCGCGGCGCAGCGGTTTCTTGATTGA
Upstream 100 bases:
>100_bases ACGGTGACCGCTTCCGGTTCAACGTGCGTGCCAGTGTGCCGTTGCTCGGCGTGGTAGCGGCGTATCGAGGTTATCTCGAC CTGTCGACGATGGAGCGCGA
Downstream 100 bases:
>100_bases CCTGCCGCTTAGCGCTGCAAACAGAACTCTTCGATCAGCGCGGCCACCTGTTCAGGCTGATCGTGATGCAGCATGTGCCC TGCATCCGCAATCAGCACCT
Product: putative thiol-disulfide oxidoreductase DCC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MIVVYDAHCLLCSGSIQFLLRHDRQGLLRFASMQGQTGRQLLAQAGVNPDDVDTVLFVRDGRAWRESAAVLRILHALGWP WRLAWIGWLIPATLRDALYRRVARNRYRWFGRSDTCILPPPGAAQRFLD
Sequences:
>Translated_129_residues MIVVYDAHCLLCSGSIQFLLRHDRQGLLRFASMQGQTGRQLLAQAGVNPDDVDTVLFVRDGRAWRESAAVLRILHALGWP WRLAWIGWLIPATLRDALYRRVARNRYRWFGRSDTCILPPPGAAQRFLD >Mature_129_residues MIVVYDAHCLLCSGSIQFLLRHDRQGLLRFASMQGQTGRQLLAQAGVNPDDVDTVLFVRDGRAWRESAAVLRILHALGWP WRLAWIGWLIPATLRDALYRRVARNRYRWFGRSDTCILPPPGAAQRFLD
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 14786; Mature: 14786
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVYDAHCLLCSGSIQFLLRHDRQGLLRFASMQGQTGRQLLAQAGVNPDDVDTVLFVRD CEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEC GRAWRESAAVLRILHALGWPWRLAWIGWLIPATLRDALYRRVARNRYRWFGRSDTCILPP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC PGAAQRFLD CCCHHHCCC >Mature Secondary Structure MIVVYDAHCLLCSGSIQFLLRHDRQGLLRFASMQGQTGRQLLAQAGVNPDDVDTVLFVRD CEEEEECCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEC GRAWRESAAVLRILHALGWPWRLAWIGWLIPATLRDALYRRVARNRYRWFGRSDTCILPP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC PGAAQRFLD CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]