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The map label for this gene is yrdA [C]

Identifier: 187928069

GI number: 187928069

Start: 1033462

End: 1033989

Strand: Reverse

Name: yrdA [C]

Synonym: Rpic_0976

Alternate gene names: 187928069

Gene position: 1033989-1033462 (Counterclockwise)

Preceding gene: 187928072

Following gene: 187928068

Centisome position: 26.23

GC content: 63.26

Gene sequence:

>528_bases
ATGGCCCTCTACCAACTCGGCGATGTTGCACCGACCATTGACGCCAACGCCTATGTGGCCCCGGAAGCGACCGTCATCGG
CTGCGTGGAGCTGAAGGCTCGCGCGAGCGTGTGGCCCGGTGCCGTCATCCGCGGCGACAACGAGCCGATTACCGTGGGCG
AGGCCAGCAACGTGCAGGAAGGCTCGGTGCTGCACACCGACCCGGGTTGCCCGCTGAACATCGGCGACCGCGTAACGATC
GGCCACCAGGCCATGCTCCATGGCTGCACGATCGGCGAAGGCTCTCTGATCGGCATCCAGGCGGTGGTGCTCAATCGCGC
GGTGATCGGCAAGAACTGCCTGGTGGGCGCGGGTGCGATCGTCACCGAAGGCAAGGTCTTCGAAGACGGCACGCTCATTC
TGGGCGCGCCTGCGAAGGCCGTGCGCAAACTGACGGAAGACGACATTGCCAAGATGCACCTGAACACCGAAACGTATGCA
GTGCGTCAGGCGATGTACAAGCAGCAACTGAAACGGATTGATGGATGA

Upstream 100 bases:

>100_bases
ACTTTCCGCCATTTTAATTCGACGCATCGGCCTGCCTTGCCCGGCAAGCTTGAAGACGCGCTCTTTTCCCCCACCTAAGC
AGACTCTGGAGACCGATCGC

Downstream 100 bases:

>100_bases
CTGACGAGCTGAAGAAATTTGTATTTGACGCTGCGCCCGTGCGCGGTGAACTGGTGCGCCTGGAAGGCACGTGGCAAGAA
GTGCTGAACCGCCGCCGCTA

Product: transferase hexapeptide repeat containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MALYQLGDVAPTIDANAYVAPEATVIGCVELKARASVWPGAVIRGDNEPITVGEASNVQEGSVLHTDPGCPLNIGDRVTI
GHQAMLHGCTIGEGSLIGIQAVVLNRAVIGKNCLVGAGAIVTEGKVFEDGTLILGAPAKAVRKLTEDDIAKMHLNTETYA
VRQAMYKQQLKRIDG

Sequences:

>Translated_175_residues
MALYQLGDVAPTIDANAYVAPEATVIGCVELKARASVWPGAVIRGDNEPITVGEASNVQEGSVLHTDPGCPLNIGDRVTI
GHQAMLHGCTIGEGSLIGIQAVVLNRAVIGKNCLVGAGAIVTEGKVFEDGTLILGAPAKAVRKLTEDDIAKMHLNTETYA
VRQAMYKQQLKRIDG
>Mature_174_residues
ALYQLGDVAPTIDANAYVAPEATVIGCVELKARASVWPGAVIRGDNEPITVGEASNVQEGSVLHTDPGCPLNIGDRVTIG
HQAMLHGCTIGEGSLIGIQAVVLNRAVIGKNCLVGAGAIVTEGKVFEDGTLILGAPAKAVRKLTEDDIAKMHLNTETYAV
RQAMYKQQLKRIDG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=36.6863905325444, Blast_Score=123, Evalue=6e-30,
Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=37.9310344827586, Blast_Score=117, Evalue=3e-28,
Organism=Escherichia coli, GI87081681, Length=159, Percent_Identity=35.2201257861635, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18358; Mature: 18227

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYQLGDVAPTIDANAYVAPEATVIGCVELKARASVWPGAVIRGDNEPITVGEASNVQE
CCEECCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCC
GSVLHTDPGCPLNIGDRVTIGHQAMLHGCTIGEGSLIGIQAVVLNRAVIGKNCLVGAGAI
CCEEECCCCCCCCCCCEEEECCHHHEEECCCCCCCEEEHHHHHHHHHHHCCCCEEECCEE
VTEGKVFEDGTLILGAPAKAVRKLTEDDIAKMHLNTETYAVRQAMYKQQLKRIDG
EECCEEECCCCEEEECCHHHHHHHCHHHHHEEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALYQLGDVAPTIDANAYVAPEATVIGCVELKARASVWPGAVIRGDNEPITVGEASNVQE
CEECCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCEEEECCCCCEEECCCCCCCC
GSVLHTDPGCPLNIGDRVTIGHQAMLHGCTIGEGSLIGIQAVVLNRAVIGKNCLVGAGAI
CCEEECCCCCCCCCCCEEEECCHHHEEECCCCCCCEEEHHHHHHHHHHHCCCCEEECCEE
VTEGKVFEDGTLILGAPAKAVRKLTEDDIAKMHLNTETYAVRQAMYKQQLKRIDG
EECCEEECCCCEEEECCHHHHHHHCHHHHHEEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]