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The map label for this gene is iscR [H]

Identifier: 187927978

GI number: 187927978

Start: 938101

End: 938694

Strand: Direct

Name: iscR [H]

Synonym: Rpic_0883

Alternate gene names: 187927978

Gene position: 938101-938694 (Clockwise)

Preceding gene: 187927972

Following gene: 187927979

Centisome position: 23.79

GC content: 64.48

Gene sequence:

>594_bases
ATGAGATTGACCACCAAAGGCCGCTTCGCGGTCACCGCCATGATTGACTTGGCGCTGCGCCAAGAGCAGGGTCCGGTCAC
GCTGGCCGGCATCAGCCAGCGTCAGAAGATTTCGCTGTCGTATCTTGAGCAGCTGTTCGGCAAACTGCGCCGCCACGAAA
TCGTGGAAAGCGTGCGCGGTCCGGGCGGCGGCTACAGCCTCGCCCGCCGTGCCGACGACGTTACCGTTGCCGACATCATC
ATCGCCGTGGATGAGCCGCTGGACGCCACCCAATGCGGCGGCAAGGGCAACTGCGGCGGCGAAGAGCATGTCGGTGGCCA
TACGGGCCGCTGCATGACGCACGATTTGTGGGCCACGCTCAATCAGAAGATGGTCGAGTATCTCGATTCGGTGTCGCTGC
AGAACCTGGTCGATCAGCAACGCGAGCGTCAGCCAGAAGTGATCCAGGACATGCGTGAAGCGCGTCCGGCTCGCCGCGAA
CGCACACCGACACGCGCCCGCGCCGTTGACACGCCGGCTACCGCGTCGGTGGCCGCCGAGCCCGTCAAGCGAGCACCGCT
GGTCAACTCCGTTTTCAGTCTGGCGCAGTCGTGA

Upstream 100 bases:

>100_bases
ATCCCCTTGCTGCGACGCGGAATCCCCCGACACCTTAGTTGACCGATTTTGTCGGGTTCCTTTATACTTGAGCAAAACGA
TCAGGTATTTCCCCGACGCC

Downstream 100 bases:

>100_bases
TTGCGCTAGCGTGAGACTGGCCGCGACGCCAGTCCACACAAGAACATCGCCCCCCACACAAGGCAGACAAGATATGAGCA
CCCCGCAACTTCCCATCTAC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVIQDMREARPARRE
RTPTRARAVDTPATASVAAEPVKRAPLVNSVFSLAQS

Sequences:

>Translated_197_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVIQDMREARPARRE
RTPTRARAVDTPATASVAAEPVKRAPLVNSVFSLAQS
>Mature_197_residues
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRGPGGGYSLARRADDVTVADII
IAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATLNQKMVEYLDSVSLQNLVDQQRERQPEVIQDMREARPARRE
RTPTRARAVDTPATASVAAEPVKRAPLVNSVFSLAQS

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=140, Percent_Identity=50, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 21604; Mature: 21604

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG
CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL
CCCCHHHHHHCCCCEEHHEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NQKMVEYLDSVSLQNLVDQQRERQPEVIQDMREARPARRERTPTRARAVDTPATASVAAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCHHHHCCCCCHHHHHHH
PVKRAPLVNSVFSLAQS
HHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG
CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL
CCCCHHHHHHCCCCEEHHEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
NQKMVEYLDSVSLQNLVDQQRERQPEVIQDMREARPARRERTPTRARAVDTPATASVAAE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCHHHHCCCCCHHHHHHH
PVKRAPLVNSVFSLAQS
HHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA