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The map label for this gene is 187927960

Identifier: 187927960

GI number: 187927960

Start: 916831

End: 917199

Strand: Direct

Name: 187927960

Synonym: Rpic_0865

Alternate gene names: NA

Gene position: 916831-917199 (Clockwise)

Preceding gene: 187927955

Following gene: 187927961

Centisome position: 23.25

GC content: 62.33

Gene sequence:

>369_bases
ATGAAAAAGATCCTCACCATGGTGGCCGCCTTGGGCACATTAGGCGCACTGTCCGCCGCAGCCAACAGCGCCGCCGCTGC
CGACGTTCAGGGCAACGCGGCCGCCGCCGAGAACAAGGTCGCCATGTGTATCGGCTGCCATGCCATCCCCGACTACAAGA
CGTCGTTCCCCGAGGTGTATCGCGTGCCCTATCTGGGCGGCCAGAACGCCAAATACATTGAAAGCGCGCTGCATGCGTAT
CAAAAGGGTGACCGCAAGCACCCGACGATGCGTGCTATCGCCGGGTCGCTGACTGACCAGGACATCGCCAACCTGGCCGC
CTATTACGCGGCGCAGACGCCGGCCACCCAAAACAATCCGCAGAAGTGA

Upstream 100 bases:

>100_bases
GTTGCCAACGGCGGGTGAATGCGCCCAGCGAGACAGCCGGCTGAGACGAGCCAAGCCGGCAGGGCGAGCAGGATTCTGAA
ACTCCACGCTTAAGAACGAG

Downstream 100 bases:

>100_bases
CGAGGAACAATATGAAGAAGATCTCCCTCGCAATCTCGTTCAATCTGGGCGCGCTGATGCTGGCTGCCACCGTGTCGGCG
CAAGCTGCCGATATTGAAAA

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKILTMVAALGTLGALSAAANSAAAADVQGNAAAAENKVAMCIGCHAIPDYKTSFPEVYRVPYLGGQNAKYIESALHAY
QKGDRKHPTMRAIAGSLTDQDIANLAAYYAAQTPATQNNPQK

Sequences:

>Translated_122_residues
MKKILTMVAALGTLGALSAAANSAAAADVQGNAAAAENKVAMCIGCHAIPDYKTSFPEVYRVPYLGGQNAKYIESALHAY
QKGDRKHPTMRAIAGSLTDQDIANLAAYYAAQTPATQNNPQK
>Mature_122_residues
MKKILTMVAALGTLGALSAAANSAAAADVQGNAAAAENKVAMCIGCHAIPDYKTSFPEVYRVPYLGGQNAKYIESALHAY
QKGDRKHPTMRAIAGSLTDQDIANLAAYYAAQTPATQNNPQK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12784; Mature: 12784

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILTMVAALGTLGALSAAANSAAAADVQGNAAAAENKVAMCIGCHAIPDYKTSFPEVY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHE
RVPYLGGQNAKYIESALHAYQKGDRKHPTMRAIAGSLTDQDIANLAAYYAAQTPATQNNP
ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
QK
CC
>Mature Secondary Structure
MKKILTMVAALGTLGALSAAANSAAAADVQGNAAAAENKVAMCIGCHAIPDYKTSFPEVY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHE
RVPYLGGQNAKYIESALHAYQKGDRKHPTMRAIAGSLTDQDIANLAAYYAAQTPATQNNP
ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
QK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]