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The map label for this gene is speE [H]

Identifier: 187927955

GI number: 187927955

Start: 912331

End: 913206

Strand: Direct

Name: speE [H]

Synonym: Rpic_0860

Alternate gene names: 187927955

Gene position: 912331-913206 (Clockwise)

Preceding gene: 187927954

Following gene: 187927960

Centisome position: 23.14

GC content: 64.27

Gene sequence:

>876_bases
ATGACGCTGTTGAAACGTAAATCCATCGAGGCCGTCGCCTCGCGCCGTCCGGCCCGCGCCAAGCGCGAAGACCGCCAGAC
CCACGATGACGAACCGAAGCGCATGGCCCCGCGCTTTGCTCCTGTCACGTTCTCTGAACTGACGGGTGTGCGCTACCTCC
ACTTCGGTACCGAATGGGTGCAGGGCGCCATGCGGCTGTCCAAGCCCGATGCCATCGAACTGGAATATGCGCAGCAGATG
ATGGCGTGGCTGCTGTTTCTCGACCCGGCTGCGCGAGCGGACTTCCACGTCGTGCAACTCGGTCTGGGGGCTGCCGCGCT
CACCAAGTTCTGCCATCGTCATCTCGCGCCGGCGCAGGTGACGGCAGTGGAGCTGAACCCGTCCGTGATCGTCGCGGCGC
GCAGCATGTTCGGCCTGCCGTTTGACGACGCGCGGTTGAGCGTGCTCGAACAGGACGCCTACGACTGGGTGATGGACGCC
AGCCACCATGGCACAGTCGATGCGCTGCAGATCGACCTGTACGACGCCACCGCGCGCGGCCCTGTGCTCGATACGCCCGC
GTTCTACAAGGCTTGCCGCCAGGTGTTGCGCTCGCCGGGTGTGATGACGATCAACCTGTTTGGCGATCACACCAGCTTTC
CGCGCAATATCGAGCGCATTTGTGACGCGTTCGACAATCGCGTGCTTGTCTTCCCTGAAGTGCACGATGGCAATGTGATC
GCGCTGGCGTTCAATGGGCCGCCGCTGCACGTCAGTTGGGAAGATGTGCAGACGCGGGCTGCCGCGCTGCAGGCCTCGCT
CAAGCTGCCGACCAAGGGCTGGGCCGACGGTTTGCGCAGTGCCAACGCCGGCCAGGAAGACGCGCTGTCGATCTGA

Upstream 100 bases:

>100_bases
TGCGCGATGCCAAGCACTGGACGCGCTATGCCAAAGACCACAATCGCGAATGGCTGCAGCGTGCCGCGGCCGCTCAGTCT
TCTTCCCGTTGACCCGCTTT

Downstream 100 bases:

>100_bases
TCGGAGCTGCGCGCCGTCCCATGCAAAACGCCCCGATTTGCGGGGCGTTTGCTTTTGTTTGGAGGCGCACTCAGGCGGCG
TCGCCCATGCCTGGCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTLLKRKSIEAVASRRPARAKREDRQTHDDEPKRMAPRFAPVTFSELTGVRYLHFGTEWVQGAMRLSKPDAIELEYAQQM
MAWLLFLDPAARADFHVVQLGLGAAALTKFCHRHLAPAQVTAVELNPSVIVAARSMFGLPFDDARLSVLEQDAYDWVMDA
SHHGTVDALQIDLYDATARGPVLDTPAFYKACRQVLRSPGVMTINLFGDHTSFPRNIERICDAFDNRVLVFPEVHDGNVI
ALAFNGPPLHVSWEDVQTRAAALQASLKLPTKGWADGLRSANAGQEDALSI

Sequences:

>Translated_291_residues
MTLLKRKSIEAVASRRPARAKREDRQTHDDEPKRMAPRFAPVTFSELTGVRYLHFGTEWVQGAMRLSKPDAIELEYAQQM
MAWLLFLDPAARADFHVVQLGLGAAALTKFCHRHLAPAQVTAVELNPSVIVAARSMFGLPFDDARLSVLEQDAYDWVMDA
SHHGTVDALQIDLYDATARGPVLDTPAFYKACRQVLRSPGVMTINLFGDHTSFPRNIERICDAFDNRVLVFPEVHDGNVI
ALAFNGPPLHVSWEDVQTRAAALQASLKLPTKGWADGLRSANAGQEDALSI
>Mature_290_residues
TLLKRKSIEAVASRRPARAKREDRQTHDDEPKRMAPRFAPVTFSELTGVRYLHFGTEWVQGAMRLSKPDAIELEYAQQMM
AWLLFLDPAARADFHVVQLGLGAAALTKFCHRHLAPAQVTAVELNPSVIVAARSMFGLPFDDARLSVLEQDAYDWVMDAS
HHGTVDALQIDLYDATARGPVLDTPAFYKACRQVLRSPGVMTINLFGDHTSFPRNIERICDAFDNRVLVFPEVHDGNVIA
LAFNGPPLHVSWEDVQTRAAALQASLKLPTKGWADGLRSANAGQEDALSI

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 32271; Mature: 32140

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLKRKSIEAVASRRPARAKREDRQTHDDEPKRMAPRFAPVTFSELTGVRYLHFGTEWV
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCEEEEECCHHHH
QGAMRLSKPDAIELEYAQQMMAWLLFLDPAARADFHVVQLGLGAAALTKFCHRHLAPAQV
HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEE
TAVELNPSVIVAARSMFGLPFDDARLSVLEQDAYDWVMDASHHGTVDALQIDLYDATARG
EEEEECCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCC
PVLDTPAFYKACRQVLRSPGVMTINLFGDHTSFPRNIERICDAFDNRVLVFPEVHDGNVI
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEE
ALAFNGPPLHVSWEDVQTRAAALQASLKLPTKGWADGLRSANAGQEDALSI
EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TLLKRKSIEAVASRRPARAKREDRQTHDDEPKRMAPRFAPVTFSELTGVRYLHFGTEWV
CCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCEEEEECCHHHH
QGAMRLSKPDAIELEYAQQMMAWLLFLDPAARADFHVVQLGLGAAALTKFCHRHLAPAQV
HHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEE
TAVELNPSVIVAARSMFGLPFDDARLSVLEQDAYDWVMDASHHGTVDALQIDLYDATARG
EEEEECCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCC
PVLDTPAFYKACRQVLRSPGVMTINLFGDHTSFPRNIERICDAFDNRVLVFPEVHDGNVI
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEE
ALAFNGPPLHVSWEDVQTRAAALQASLKLPTKGWADGLRSANAGQEDALSI
EEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]