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The map label for this gene is 187927939

Identifier: 187927939

GI number: 187927939

Start: 896398

End: 897684

Strand: Reverse

Name: 187927939

Synonym: Rpic_0844

Alternate gene names: NA

Gene position: 897684-896398 (Counterclockwise)

Preceding gene: 187927940

Following gene: 187927938

Centisome position: 22.77

GC content: 68.14

Gene sequence:

>1287_bases
ATGCCATTGAACCGACCTTCCACCACCGTCGCCACGGCCCTCTGGGGCGCGCTTTATCTGGTGGCCGCCATCGTGTCGCA
CCGGCTGAATGGGCCAATCGACATGACGGGCTACATCTGGCTGCCGGCGGGCGTGGCCATGGCCGCGTTCATGCTGCGGC
CGTACCGCGAATGGCCCGGGCTGGGGGCAGCGTTTGCCGTGGCGCAGCTGGTGCTGGCGGCGATCGAGCGCACCAACCCC
GCGCACGCGATGCTGTTCGTGCTGGACGAAGCAGGTAGCGCGGCGCTGGCCGTGGCACTGGTGCGACTGGCACGCGTCCC
GCTCGAAGGGCTTTACTTCGTGCGCGCGATGCTGGTGGCGGGCGCGGTCAGTGCGCTGCTTGGGGCGTTGTTCGGCGCGG
CATGGTTTGCGTGGTCGCAAGGCGGCTCGTTCGGGCACGTGCTGCGCATCTGGGCGGCATCGGATTTCCTGGGCGTGCTG
ATCGTCACGCCGGTGCTGGCGGCGTGGTCGCGCTTTCGCGCGTTCCGCTCGGGCGGCACCGACCGCACGGATTTCCTGCT
CGGTCTGGCGGCCGTCGTTGCGCTGGCGCTGTCGTCGTACATCATTTTCGATGGCAACAGCGATGCCAAGTTTGGCGATG
GAATCGGCTTTGCGCTGACGTACGTCCCGCTGTTCTTTGCCGTGGTGGTGGCGCTGATGTGGGGCGGCCGCGGTGGCTCG
TTGGCGGTGCTGCTGCTCACGCTGGTGGCGCTCACGCAAACCGCCGAAGGCGACGGCCCGTTCGCCGTGCTGGATCACCA
CTATGGCCAGTCGCTGCTGGAAACGCAGCTGTACCTCGGCATTGCCGCGCTGCTGGTGCTGCTGGTGAGCGCACTCAAGA
CCACGCGCGAACAACTGCACGAGCAAAGCGCGCAGTGGCAAAACCGCGTCGAACTGGCGCTGGCGGCATCGGGCCAGCTT
GTCTACACCATCGACCCTGCCAGCGGCCGCATTGACTGGGGCGGCGACGTCGCGCTCATGTTCGGACACGAACCGGCAAG
CATGGCGTCGATCTCGACCGTACTGCAACTGGTGCATCCGGATGACCGCGATGCGCTGCGCGCGCGCTGGCTCGGGGCCG
CCGTGCTGGAGGGCGATGCAGCAACGCCCGCACGCCGCCAGACGCTGCGCATCACCGCACGCGACGGCACGCTGCACACC
GTGGTGGATACCGGTCGCCCCCTGACGGATGCCGTTGGCAACACGGCGCTCGTGGCCGGGACCTGGTCGGTCGAGACCGC
ACTGTGA

Upstream 100 bases:

>100_bases
CCGTGGTCTAAGCCCGCCTGAAACCGATTGCGATAGCATCATCAACCGCGCACGGCACCTACGCCGGCGCGGTTTTTTGT
TTTCACCGAGGGAAACCCGG

Downstream 100 bases:

>100_bases
CCCCATCGGTGCCCGGCAGCACGGCCGTGCTGCTGATCCATGGTCTGGGCGGCACGGCCTACGACGTGGGCGTGCTGCAG
AAAGCGCTGCGCAACGCCGG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Integral Membrane Sensor Protein; PAS Fold Family Protein; PAS/PAC Sensor Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPLNRPSTTVATALWGALYLVAAIVSHRLNGPIDMTGYIWLPAGVAMAAFMLRPYREWPGLGAAFAVAQLVLAAIERTNP
AHAMLFVLDEAGSAALAVALVRLARVPLEGLYFVRAMLVAGAVSALLGALFGAAWFAWSQGGSFGHVLRIWAASDFLGVL
IVTPVLAAWSRFRAFRSGGTDRTDFLLGLAAVVALALSSYIIFDGNSDAKFGDGIGFALTYVPLFFAVVVALMWGGRGGS
LAVLLLTLVALTQTAEGDGPFAVLDHHYGQSLLETQLYLGIAALLVLLVSALKTTREQLHEQSAQWQNRVELALAASGQL
VYTIDPASGRIDWGGDVALMFGHEPASMASISTVLQLVHPDDRDALRARWLGAAVLEGDAATPARRQTLRITARDGTLHT
VVDTGRPLTDAVGNTALVAGTWSVETAL

Sequences:

>Translated_428_residues
MPLNRPSTTVATALWGALYLVAAIVSHRLNGPIDMTGYIWLPAGVAMAAFMLRPYREWPGLGAAFAVAQLVLAAIERTNP
AHAMLFVLDEAGSAALAVALVRLARVPLEGLYFVRAMLVAGAVSALLGALFGAAWFAWSQGGSFGHVLRIWAASDFLGVL
IVTPVLAAWSRFRAFRSGGTDRTDFLLGLAAVVALALSSYIIFDGNSDAKFGDGIGFALTYVPLFFAVVVALMWGGRGGS
LAVLLLTLVALTQTAEGDGPFAVLDHHYGQSLLETQLYLGIAALLVLLVSALKTTREQLHEQSAQWQNRVELALAASGQL
VYTIDPASGRIDWGGDVALMFGHEPASMASISTVLQLVHPDDRDALRARWLGAAVLEGDAATPARRQTLRITARDGTLHT
VVDTGRPLTDAVGNTALVAGTWSVETAL
>Mature_427_residues
PLNRPSTTVATALWGALYLVAAIVSHRLNGPIDMTGYIWLPAGVAMAAFMLRPYREWPGLGAAFAVAQLVLAAIERTNPA
HAMLFVLDEAGSAALAVALVRLARVPLEGLYFVRAMLVAGAVSALLGALFGAAWFAWSQGGSFGHVLRIWAASDFLGVLI
VTPVLAAWSRFRAFRSGGTDRTDFLLGLAAVVALALSSYIIFDGNSDAKFGDGIGFALTYVPLFFAVVVALMWGGRGGSL
AVLLLTLVALTQTAEGDGPFAVLDHHYGQSLLETQLYLGIAALLVLLVSALKTTREQLHEQSAQWQNRVELALAASGQLV
YTIDPASGRIDWGGDVALMFGHEPASMASISTVLQLVHPDDRDALRARWLGAAVLEGDAATPARRQTLRITARDGTLHTV
VDTGRPLTDAVGNTALVAGTWSVETAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45298; Mature: 45167

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNRPSTTVATALWGALYLVAAIVSHRLNGPIDMTGYIWLPAGVAMAAFMLRPYREWPG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
LGAAFAVAQLVLAAIERTNPAHAMLFVLDEAGSAALAVALVRLARVPLEGLYFVRAMLVA
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
GAVSALLGALFGAAWFAWSQGGSFGHVLRIWAASDFLGVLIVTPVLAAWSRFRAFRSGGT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DRTDFLLGLAAVVALALSSYIIFDGNSDAKFGDGIGFALTYVPLFFAVVVALMWGGRGGS
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
LAVLLLTLVALTQTAEGDGPFAVLDHHYGQSLLETQLYLGIAALLVLLVSALKTTREQLH
HHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSAQWQNRVELALAASGQLVYTIDPASGRIDWGGDVALMFGHEPASMASISTVLQLVHP
HHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
DDRDALRARWLGAAVLEGDAATPARRQTLRITARDGTLHTVVDTGRPLTDAVGNTALVAG
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCEEEEE
TWSVETAL
CCCCCCCC
>Mature Secondary Structure 
PLNRPSTTVATALWGALYLVAAIVSHRLNGPIDMTGYIWLPAGVAMAAFMLRPYREWPG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
LGAAFAVAQLVLAAIERTNPAHAMLFVLDEAGSAALAVALVRLARVPLEGLYFVRAMLVA
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
GAVSALLGALFGAAWFAWSQGGSFGHVLRIWAASDFLGVLIVTPVLAAWSRFRAFRSGGT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DRTDFLLGLAAVVALALSSYIIFDGNSDAKFGDGIGFALTYVPLFFAVVVALMWGGRGGS
CHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
LAVLLLTLVALTQTAEGDGPFAVLDHHYGQSLLETQLYLGIAALLVLLVSALKTTREQLH
HHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSAQWQNRVELALAASGQLVYTIDPASGRIDWGGDVALMFGHEPASMASISTVLQLVHP
HHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC
DDRDALRARWLGAAVLEGDAATPARRQTLRITARDGTLHTVVDTGRPLTDAVGNTALVAG
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCEEEEE
TWSVETAL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA