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The map label for this gene is 187927935

Identifier: 187927935

GI number: 187927935

Start: 890647

End: 891054

Strand: Direct

Name: 187927935

Synonym: Rpic_0840

Alternate gene names: NA

Gene position: 890647-891054 (Clockwise)

Preceding gene: 187927934

Following gene: 187927936

Centisome position: 22.59

GC content: 64.46

Gene sequence:

>408_bases
GTGGCGTTGGAAGGGGCCGGCCTGTTTGGCGTCAACAGCCCGACGCGGGAAAACGGTGGCAACACGAGCAACGGCGCCAA
CGAAGGCTTCTTCCTGGGCGGCTTCCAGCACCTTTCGGCGTATGCGCAGGATCAGTTCAACGGCCAGTACATGCTGTATG
GCCGCCTGACCTATCTGTACGACCTGCGCGTTGACGATCTGCTGGGCCTGCGCGCGCCGGTGTTCGGCGCCAGCGCCGAG
GCCGGCAATGTCTGGCAGCTGCGCAACAACTTTGGCAAGGGCCCTTACCTGAAGAGCGGCAGCGTATTCGTCGGTGGCAC
CAGCCCGATCGGGCCGCTGTACTTCGGTTTTGCGGTGGCGCCGCAGGGCGTGTGGAACGTGTACCTGCAGCTCGGTCGCG
TCTTCTGA

Upstream 100 bases:

>100_bases
CGTCGTCTTTGCCATGCTCATGCTCGTTCACGCCGCACCTGTCGTCCAAAGTGCATAACACGCTCTATGGGCGACGAGCT
ACGGCCGCCACACGTTCAAT

Downstream 100 bases:

>100_bases
AACCGCATCAAGGGGCAGCAGGCCTGCCTGGCGTACGGTCAGCGCCTGCTTCGTAAGGTCTTGATCAGACTGGGGAAATC
AATCGGTCAGCTAGCGGCGG

Product: patatin

Products: NA

Alternate protein names: Serine Protease; Outer Membrane Protein; Patatin-Like Phospholipase Family; Patatin-Like Phospholipase; Patatin-Like Lipid Acyl Hydrolase Protein; OMP85 Family Outer Membrane Protein; Lipoprotein Transmembrane Protein

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MALEGAGLFGVNSPTRENGGNTSNGANEGFFLGGFQHLSAYAQDQFNGQYMLYGRLTYLYDLRVDDLLGLRAPVFGASAE
AGNVWQLRNNFGKGPYLKSGSVFVGGTSPIGPLYFGFAVAPQGVWNVYLQLGRVF

Sequences:

>Translated_135_residues
MALEGAGLFGVNSPTRENGGNTSNGANEGFFLGGFQHLSAYAQDQFNGQYMLYGRLTYLYDLRVDDLLGLRAPVFGASAE
AGNVWQLRNNFGKGPYLKSGSVFVGGTSPIGPLYFGFAVAPQGVWNVYLQLGRVF
>Mature_134_residues
ALEGAGLFGVNSPTRENGGNTSNGANEGFFLGGFQHLSAYAQDQFNGQYMLYGRLTYLYDLRVDDLLGLRAPVFGASAEA
GNVWQLRNNFGKGPYLKSGSVFVGGTSPIGPLYFGFAVAPQGVWNVYLQLGRVF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14528; Mature: 14397

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEGAGLFGVNSPTRENGGNTSNGANEGFFLGGFQHLSAYAQDQFNGQYMLYGRLTYLY
CCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEEEEE
DLRVDDLLGLRAPVFGASAEAGNVWQLRNNFGKGPYLKSGSVFVGGTSPIGPLYFGFAVA
ECCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCEEECCCCCCCHHHHHEECC
PQGVWNVYLQLGRVF
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
ALEGAGLFGVNSPTRENGGNTSNGANEGFFLGGFQHLSAYAQDQFNGQYMLYGRLTYLY
CCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEEEEEE
DLRVDDLLGLRAPVFGASAEAGNVWQLRNNFGKGPYLKSGSVFVGGTSPIGPLYFGFAVA
ECCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCEEECCCCCCCHHHHHEECC
PQGVWNVYLQLGRVF
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA