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The map label for this gene is etfB [H]

Identifier: 187927889

GI number: 187927889

Start: 839177

End: 839926

Strand: Direct

Name: etfB [H]

Synonym: Rpic_0793

Alternate gene names: 187927889

Gene position: 839177-839926 (Clockwise)

Preceding gene: 187927888

Following gene: 187927890

Centisome position: 21.29

GC content: 63.2

Gene sequence:

>750_bases
ATGAAAGTCCTGGTCGCAGTCAAGCGCGTGATCGATTACAACGTGAAGGTTCGCGTGAAGACGGACGGCAGCGGTGTCGA
TCTGGCCAACGTCAAGATGAGCATGAACCCGTTCGACGAGATCGCCGTGGAAGAGGCGGTTCGCCTGAAGGAAGCGGGCG
TCGCTACCGAAGTGATTGCCGTGTCGTGCGGCGTGACGCAGTGCCAGGAAACTCTGCGCACCGCCATGGCCATCGGCGCC
GATCGCGGCATCCTGGTCGAGACTGCCGAAGAGCTGCAGCCGCTGGCTGTCGCCAAGCTGCTCAAGGCGCTGGTCGACAA
GGAGCAGCCTCAGCTGATCATCCTCGGCAAGCAGGCGATTGACGACGACGCCAATCAGACCGGCCAAATGCTGGCTGCGC
TGGCGGGGCTGCCGCAAGCGACGTTTGCCTCGAAGGTGCAGATTGCCGACGGCAAGGCTTCGGTCACGCGTGAAGTGGAC
GGTGGCCTGGAAACCCTGTCGGTCAAGCTGCCGGCCGTGGTCACCACCGACCTGCGCCTGAACGAGCCGCGCTACGTGAC
GCTGCCCAACATCATGAAGGCGAAAAAGAAGCAACTCGACACGGTCAAGCCGGAAGACCTGGGCGTGGACGTTGCACCGC
GCCTGAAGACGCTGAAGGTGGTCGAGCCCGCCAAGCGCAGCGCTGGCGTGATGGTGCCCGATGTGGCCACGCTGGTCGCC
AAGCTCAAGACCGAAGCGAAGGTGCTGTAA

Upstream 100 bases:

>100_bases
AAAATAGCACGACCGTTCGGAAAAATTACGCGAGCGACCGGCCCCCCTTATAATGGCCGGCGTTTTGCAAAATCGTCTTA
TCAATTAGTGGAGTGAGCGC

Downstream 100 bases:

>100_bases
GCGGTCTCCTGACTGCAAGCAACTTCAAGCACACCGAACAGGCAGATCAAGATGACCTCACTCGTTATTGCTGAACACGA
CAATCAAACCATCAAGGCCG

Product: electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAVKRVIDYNVKVRVKTDGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVTQCQETLRTAMAIGA
DRGILVETAEELQPLAVAKLLKALVDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIADGKASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVVEPAKRSAGVMVPDVATLVA
KLKTEAKVL

Sequences:

>Translated_249_residues
MKVLVAVKRVIDYNVKVRVKTDGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVTQCQETLRTAMAIGA
DRGILVETAEELQPLAVAKLLKALVDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIADGKASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVVEPAKRSAGVMVPDVATLVA
KLKTEAKVL
>Mature_249_residues
MKVLVAVKRVIDYNVKVRVKTDGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVTQCQETLRTAMAIGA
DRGILVETAEELQPLAVAKLLKALVDKEQPQLIILGKQAIDDDANQTGQMLAALAGLPQATFASKVQIADGKASVTREVD
GGLETLSVKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVVEPAKRSAGVMVPDVATLVA
KLKTEAKVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=63.5627530364373, Blast_Score=298, Evalue=3e-81,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=60.7594936708861, Blast_Score=273, Evalue=1e-73,
Organism=Escherichia coli, GI87081682, Length=232, Percent_Identity=27.1551724137931, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=55.7312252964427, Blast_Score=260, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6321646, Length=253, Percent_Identity=47.8260869565217, Blast_Score=221, Evalue=9e-59,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=60.5691056910569, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=60.5691056910569, Blast_Score=268, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26572; Mature: 26572

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVIDYNVKVRVKTDGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHE
VSCGVTQCQETLRTAMAIGADRGILVETAEELQPLAVAKLLKALVDKEQPQLIILGKQAI
ECCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDANQTGQMLAALAGLPQATFASKVQIADGKASVTREVDGGLETLSVKLPAVVTTDLRL
CCCCHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVVEPAKRSAGVMVPDVATLVA
CCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCHHEEEEECCHHHCCCEECCHHHHHHH
KLKTEAKVL
HHHHHHCCC
>Mature Secondary Structure
MKVLVAVKRVIDYNVKVRVKTDGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIA
CHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHE
VSCGVTQCQETLRTAMAIGADRGILVETAEELQPLAVAKLLKALVDKEQPQLIILGKQAI
ECCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDANQTGQMLAALAGLPQATFASKVQIADGKASVTREVDGGLETLSVKLPAVVTTDLRL
CCCCHHHHHHHHHHHCCCCHHHHCEEEECCCCCHHHHHHCCCCEEEEEEECEEEEECEEE
NEPRYVTLPNIMKAKKKQLDTVKPEDLGVDVAPRLKTLKVVEPAKRSAGVMVPDVATLVA
CCCCEEECCHHHHHHHHHCCCCCCHHCCCCCCCCHHEEEEECCHHHCCCEECCHHHHHHH
KLKTEAKVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]