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The map label for this gene is metQ [H]

Identifier: 187927888

GI number: 187927888

Start: 838186

End: 838986

Strand: Direct

Name: metQ [H]

Synonym: Rpic_0792

Alternate gene names: 187927888

Gene position: 838186-838986 (Clockwise)

Preceding gene: 187927887

Following gene: 187927889

Centisome position: 21.26

GC content: 59.55

Gene sequence:

>801_bases
ATGAATCGCCGTCAACTGCTGCAATGGTCCGCGAGCCTTGGTGCCGCATTGGCATTGGTCGCAGGCAGCGCCCTGGCGCA
GAGCAAGCCGATCAAGATTGGCGTGACCGCCGGGCCGCACGCCGAGATCATGGAAGAAGTAAAGAAGGTCGCCGAGAAGG
ACGGCTTGAAGCTGCAGATTGTTGAGTTCAACGATTACATCCAGCCGAACGCCGCCCTGGCTGCCGGCGATCTGGATGCA
AACAGCTATCAGCACCAGCCGTATCTGGACGACCAGATTGCCACGCGCGGTTACAAGTTCGTGAGCGTCGGCCAGACCAT
CACCTTCCCGATGGGGATCTACTCGAAGAAGATCAAGTCGCTGAAGGAGTTGAAGGACGGTGCGCGTTTCGGTCTGCCGA
ACGATCCGACCAACGGAGGCCGCGCGCTGCTGCTGCTGCAATCGCAAGGCGTGATCAAGCTCAAGCCGAACGCCGGTTTC
AAGGCTTCGCCGCGCGACGTGGCTGATAACCCGAAGAAGCTGAAGTTCGTCGAATTGGATGCCGCGCAACTGCCGCGCTC
GCTGGATGATCTGGATGCCGCCGCCATCAACGGCAATTACGCTGAAAAGGCCAACCTGGACCCGACCAAGGACGGCATCG
CCATCGAAAGCCCGAAGGGTCCTTACGCCAACGTGATTGCCATCCGCGCCGCCGACAAGGATCAACCCTGGGTCGCCAAG
CTCGTGAAGGCGTATCATTCCGACGCCGTGAAGTCCTTCGTCAAGGCGAAGTACAAAGATGCGGTGATTGTGGCTTGGTA
G

Upstream 100 bases:

>100_bases
GATCGTCTTTGTGCAGGCGGTGCAATCGACGGGCGATTGGCTCGTGCGCCGCCTGAGCCACCGTTAATCATTCAATCGAC
AGACAGAACGAGGAAACACA

Downstream 100 bases:

>100_bases
CCACTTTTGTGATCCGTAGGTGATCCGGTAGAGGGTTCTACCAAACAGATTGCCGGACGTTTGACTGGCGTCCGGCAAAT
TTTCGCGGTTAAAATAGCAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNRRQLLQWSASLGAALALVAGSALAQSKPIKIGVTAGPHAEIMEEVKKVAEKDGLKLQIVEFNDYIQPNAALAAGDLDA
NSYQHQPYLDDQIATRGYKFVSVGQTITFPMGIYSKKIKSLKELKDGARFGLPNDPTNGGRALLLLQSQGVIKLKPNAGF
KASPRDVADNPKKLKFVELDAAQLPRSLDDLDAAAINGNYAEKANLDPTKDGIAIESPKGPYANVIAIRAADKDQPWVAK
LVKAYHSDAVKSFVKAKYKDAVIVAW

Sequences:

>Translated_266_residues
MNRRQLLQWSASLGAALALVAGSALAQSKPIKIGVTAGPHAEIMEEVKKVAEKDGLKLQIVEFNDYIQPNAALAAGDLDA
NSYQHQPYLDDQIATRGYKFVSVGQTITFPMGIYSKKIKSLKELKDGARFGLPNDPTNGGRALLLLQSQGVIKLKPNAGF
KASPRDVADNPKKLKFVELDAAQLPRSLDDLDAAAINGNYAEKANLDPTKDGIAIESPKGPYANVIAIRAADKDQPWVAK
LVKAYHSDAVKSFVKAKYKDAVIVAW
>Mature_266_residues
MNRRQLLQWSASLGAALALVAGSALAQSKPIKIGVTAGPHAEIMEEVKKVAEKDGLKLQIVEFNDYIQPNAALAAGDLDA
NSYQHQPYLDDQIATRGYKFVSVGQTITFPMGIYSKKIKSLKELKDGARFGLPNDPTNGGRALLLLQSQGVIKLKPNAGF
KASPRDVADNPKKLKFVELDAAQLPRSLDDLDAAAINGNYAEKANLDPTKDGIAIESPKGPYANVIAIRAADKDQPWVAK
LVKAYHSDAVKSFVKAKYKDAVIVAW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=261, Percent_Identity=48.6590038314176, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1790093, Length=244, Percent_Identity=40.9836065573771, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28737; Mature: 28737

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRQLLQWSASLGAALALVAGSALAQSKPIKIGVTAGPHAEIMEEVKKVAEKDGLKLQI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEE
VEFNDYIQPNAALAAGDLDANSYQHQPYLDDQIATRGYKFVSVGQTITFPMGIYSKKIKS
EECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCEEEECHHHHHHHHHH
LKELKDGARFGLPNDPTNGGRALLLLQSQGVIKLKPNAGFKASPRDVADNPKKLKFVELD
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECC
AAQLPRSLDDLDAAAINGNYAEKANLDPTKDGIAIESPKGPYANVIAIRAADKDQPWVAK
HHHCCCCHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHH
LVKAYHSDAVKSFVKAKYKDAVIVAW
HHHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MNRRQLLQWSASLGAALALVAGSALAQSKPIKIGVTAGPHAEIMEEVKKVAEKDGLKLQI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEE
VEFNDYIQPNAALAAGDLDANSYQHQPYLDDQIATRGYKFVSVGQTITFPMGIYSKKIKS
EECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCEEEECHHHHHHHHHH
LKELKDGARFGLPNDPTNGGRALLLLQSQGVIKLKPNAGFKASPRDVADNPKKLKFVELD
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECC
AAQLPRSLDDLDAAAINGNYAEKANLDPTKDGIAIESPKGPYANVIAIRAADKDQPWVAK
HHHCCCCHHHHHHHEECCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHH
LVKAYHSDAVKSFVKAKYKDAVIVAW
HHHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]