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The map label for this gene is yciM [H]

Identifier: 187927878

GI number: 187927878

Start: 827885

End: 829159

Strand: Direct

Name: yciM [H]

Synonym: Rpic_0782

Alternate gene names: 187927878

Gene position: 827885-829159 (Clockwise)

Preceding gene: 187927877

Following gene: 187927879

Centisome position: 21.0

GC content: 62.43

Gene sequence:

>1275_bases
ATGGATTTTGATCTCTGGTGGCTGTTGGCCATCCCGCTGGTGTTTGGCTTGGGCTGGGCGGCTGCCCGACTCGATGCCCG
CCAGTTGCGCACCGAACAATCGTCGCTGCCGCGCTCGTATTTCAAGGGCCTGAATTTCCTGCTCAACGAGCAGCCGGACA
AGGCCATCGACGCTTTCATTGAAGTTGCGCGGCTGGACCCGGAGACTACCGAGTTGCACTTTGCGCTCGGCAGCCTGTTT
CGTCGGCGCGGCGAAACCGAACGCGCCATTCGCGTTCACCAAAATCTCGTCAATCGCCCCGATCTGCCCCCCAATGAGCG
CGATCACGCGTTGTTTGAACTGGGGCAGGATTTCCTGCGCGCGGGCTTGCTGGATCGCGCCGAGGAATCCCTGCGCATGC
TGATGGAAGGCACATTTGCCGAGCCAGCCAAGCGCGTGCTGCTGGAGTTGTACGAAGTCGAGAAAGAGTGGCGCAAAGCC
ATTGAAGCTGCGCGTGAATTGCAGAAGCTGCAAGGCAAGGATTACGCCGTGCAAATCGCGCAGTTCTGCTGCGAGGTCGC
GCAGGAAGCGCTGCAGCGCAAGGACGTGCCGACCGCCATCGAATGGTTGGAACGTGCCCTTCAGGAGAATCCCAAGAATG
TGCGAGCCACCATTCAGTTGGGCGATGTGTCGCAAGGGCAGGGCGATGTTGAAGGCGCCATCAAGCGTTGGCGTAGCATC
GAACAGCAAAACACTGCGTTCTTGCCCTTGGTGGCCGAACGGCTGATGAAGGCGTACACGCAGCTTGGTCGTGCCGCAGA
GGGGCTCGCCTGGTTGCGCTCCAAGATGGACGCACGGCTGGGCCCCGAACTGCTCGATACAGTCTACAAATACGAACTGG
ACGTGCACGGTATCGACGATGCCGTGGCGCTGATGCGCGACCAGATCCGCCGTCAGCCCTCGTTGGTGGCGCTGACGCGG
CTGGTGGAAGCCGAGGCGACGCGCGCGTCCGAGGCGGTCGGCCATGAAGCACCTGCGACGGCCGACGTAGCCGAGAGTGC
GTTGGCGGATCCGGTTGAGGCGGGCAGCAATGCTGACATCCAGCGCGCGCAGGATCTCGGCGCGATTCGCGATCTGCTGC
AAAGCCGTACGCGCAACCTGGCGCGCTATACCTGCCAGGAGTGCGGATTCCGTGCGCGCCTGTTCTATTGGCAGTGCCCG
GGCTGCAACCGCTGGGAAACGTATGCTCCGCGTCGTACCGAGACGCTCGGCGGCAGTGGCGGCGCCAGCATGTAA

Upstream 100 bases:

>100_bases
CCAGATCGGTCGCATGAAGAAGGCCGAAGAGGTGACCGAGGTGCCGACGCCCGTGGTTGCCGACTCTCCGTATCACGTTC
CCGGCCCCAAGGTCTGACGC

Downstream 100 bases:

>100_bases
TTCAGTCCGGCGCGGCAGGTGTGTGCAACGGCCGCGCTGGCGCTTTTTCAATCTTTAAGTGTTCGTATGAAAATCACCAT
CATCGGTAGCGGTTATGTCG

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDFDLWWLLAIPLVFGLGWAAARLDARQLRTEQSSLPRSYFKGLNFLLNEQPDKAIDAFIEVARLDPETTELHFALGSLF
RRRGETERAIRVHQNLVNRPDLPPNERDHALFELGQDFLRAGLLDRAEESLRMLMEGTFAEPAKRVLLELYEVEKEWRKA
IEAARELQKLQGKDYAVQIAQFCCEVAQEALQRKDVPTAIEWLERALQENPKNVRATIQLGDVSQGQGDVEGAIKRWRSI
EQQNTAFLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDDAVALMRDQIRRQPSLVALTR
LVEAEATRASEAVGHEAPATADVAESALADPVEAGSNADIQRAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCP
GCNRWETYAPRRTETLGGSGGASM

Sequences:

>Translated_424_residues
MDFDLWWLLAIPLVFGLGWAAARLDARQLRTEQSSLPRSYFKGLNFLLNEQPDKAIDAFIEVARLDPETTELHFALGSLF
RRRGETERAIRVHQNLVNRPDLPPNERDHALFELGQDFLRAGLLDRAEESLRMLMEGTFAEPAKRVLLELYEVEKEWRKA
IEAARELQKLQGKDYAVQIAQFCCEVAQEALQRKDVPTAIEWLERALQENPKNVRATIQLGDVSQGQGDVEGAIKRWRSI
EQQNTAFLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDDAVALMRDQIRRQPSLVALTR
LVEAEATRASEAVGHEAPATADVAESALADPVEAGSNADIQRAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCP
GCNRWETYAPRRTETLGGSGGASM
>Mature_424_residues
MDFDLWWLLAIPLVFGLGWAAARLDARQLRTEQSSLPRSYFKGLNFLLNEQPDKAIDAFIEVARLDPETTELHFALGSLF
RRRGETERAIRVHQNLVNRPDLPPNERDHALFELGQDFLRAGLLDRAEESLRMLMEGTFAEPAKRVLLELYEVEKEWRKA
IEAARELQKLQGKDYAVQIAQFCCEVAQEALQRKDVPTAIEWLERALQENPKNVRATIQLGDVSQGQGDVEGAIKRWRSI
EQQNTAFLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDDAVALMRDQIRRQPSLVALTR
LVEAEATRASEAVGHEAPATADVAESALADPVEAGSNADIQRAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCP
GCNRWETYAPRRTETLGGSGGASM

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=407, Percent_Identity=31.2039312039312, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47919; Mature: 47919

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDLWWLLAIPLVFGLGWAAARLDARQLRTEQSSLPRSYFKGLNFLLNEQPDKAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
EVARLDPETTELHFALGSLFRRRGETERAIRVHQNLVNRPDLPPNERDHALFELGQDFLR
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEESLRMLMEGTFAEPAKRVLLELYEVEKEWRKAIEAARELQKLQGKDYAVQIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QFCCEVAQEALQRKDVPTAIEWLERALQENPKNVRATIQLGDVSQGQGDVEGAIKRWRSI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
EQQNTAFLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
AVALMRDQIRRQPSLVALTRLVEAEATRASEAVGHEAPATADVAESALADPVEAGSNADI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCH
QRAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCPGCNRWETYAPRRTETLGGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCC
GASM
CCCC
>Mature Secondary Structure
MDFDLWWLLAIPLVFGLGWAAARLDARQLRTEQSSLPRSYFKGLNFLLNEQPDKAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH
EVARLDPETTELHFALGSLFRRRGETERAIRVHQNLVNRPDLPPNERDHALFELGQDFLR
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEESLRMLMEGTFAEPAKRVLLELYEVEKEWRKAIEAARELQKLQGKDYAVQIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QFCCEVAQEALQRKDVPTAIEWLERALQENPKNVRATIQLGDVSQGQGDVEGAIKRWRSI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
EQQNTAFLPLVAERLMKAYTQLGRAAEGLAWLRSKMDARLGPELLDTVYKYELDVHGIDD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
AVALMRDQIRRQPSLVALTRLVEAEATRASEAVGHEAPATADVAESALADPVEAGSNADI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCH
QRAQDLGAIRDLLQSRTRNLARYTCQECGFRARLFYWQCPGCNRWETYAPRRTETLGGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCC
GASM
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]