Click here to switch to the map view.

The map label for this gene is yqeZ [H]

Identifier: 187927845

GI number: 187927845

Start: 788877

End: 790271

Strand: Reverse

Name: yqeZ [H]

Synonym: Rpic_0749

Alternate gene names: 187927845

Gene position: 790271-788877 (Counterclockwise)

Preceding gene: 187927846

Following gene: 187927844

Centisome position: 20.04

GC content: 68.39

Gene sequence:

>1395_bases
ATGCGACCGTCGTTGCGGATGCGGCGTTGGACGGGATGGTTGGCAGCGGTCATCGCCGCAGTCTGGACCAGCCTTGCCGT
GGCAGCGGCGCCGGTCGTGGTGTTGCCGGTCAACGGTGCCATCGGGCCAGCCAGCGCGGCCTACGTGATCCGCGGCCTGC
AACAGGCGCGCGACCGAGGTGCGCAGCTTGTCGTACTGCAAATGGATACGCCCGGCGGCCTCGATGCGTCGATGCGCCAG
ATCATTCAGGCCATCCTTGCGTCGCCCGTGCCGGTGGCAGGTTACGTGGCGCCCGGCGGCGCGCGGGCAGCGAGCGCTGG
CACCTACATTCTCTACGCCTGCCACGTTGCGGCGATGGCGCCCGCCACGAACCTGGGTGCGGCGTCTCCCGTGGCAATCG
GCATGGGCGGCCACGCCCCGAGCCCCGGCGACGGCGCCAAGCCGGCCAGCGCGCCAAGCGCCTCTTCCAGCAACGAAGAC
ACCCTCGCCCGCAAGCAGATGCACGACGCGGCGGCGTACATCCGCGGGCTGGCGCAACTGCGCGGTCGCAACGCGGAATG
GGCCGAGCGCGCCGTGCGTGAGGCCGTGAGCCTCGACGCGACCGAAGCCGCCAGCCAGCACGTGGTCGACCTTGTTGCCG
CAAGCCTTCCTGATCTGCTCAAGCAAGTCGACGGCCGCGCGGTGCGCACGTCCGCCGGCGACGTCACGCTGCGTACAGCC
GAGGCAACCATCGTCACGCTGGAGCCCGACTGGCGCAATCACTTCCTCGGCGTCATTACCGACCCAAGCCTGGCGCTGCT
ACTGCTGACGGTGGGCGTGTATGCACTGATCTTCGAATTCTCGACCCCTGGCATGGTCGTGCCCGGCATCCTCGGCGCCG
TGTGCATCGTGGTGGCGCTCTACGGGCTGCAGATGCTCCCGATCAACTACGCGGGGCTCGCCCTCATTGCACTTGGCCTC
GGCTGTATGGTGGCTGAAGCATTCCTGCCGACGTTCGGCGCGCTCGGCGTGGGCGGCATCGTTGCGTTCGTGCTGGGTGC
GGTGATGCTGATCGATACGCAAACGCCGGGCTTTGGCGTGCCGCTTCCGCTCATCATCGGACTGGCCTTCGTAAGCCTGA
CCGTTGTTCTAGCGCTCTCCAGCCTGGCGGTGCGTGCGCGACGGCGGCCGATCGTGACCGGCGGCGATACGCTCATCGGC
ATGACAGGCGAAGTAGTGGACGTCGATACACCGGACGCCGATGCCGACAGCGACGGCTGGGCGCGCATCCATGGCGAGCG
CTGGCGCGTGCGCTGCGATGGTGGCATCGCGCGTGGCGATCAGGTGCGTGTGATCGCCCGGCGTGGGCTGACACTGATGG
TGGAACCCGTTGCCCCCCTCGCCGCGTCTTCATAA

Upstream 100 bases:

>100_bases
CCGCGCGGGAAGCCATTGCCGCCTAAACTGAAAGCGGATGCTGGGACCGTGCCGCCGGTCTGATCGGGCAAAAGCGCGGC
AATCACGGACGGAGGCGCGA

Downstream 100 bases:

>100_bases
GGAGAAGAAAAATGCTTTACGGCTTCTTCAGCGCAGGCGGCCTGATCTTCCTGGCCGTGCTGCTGGTCATCTCGTCGTTC
CGGGTGCTGCGCGAATACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MRPSLRMRRWTGWLAAVIAAVWTSLAVAAAPVVVLPVNGAIGPASAAYVIRGLQQARDRGAQLVVLQMDTPGGLDASMRQ
IIQAILASPVPVAGYVAPGGARAASAGTYILYACHVAAMAPATNLGAASPVAIGMGGHAPSPGDGAKPASAPSASSSNED
TLARKQMHDAAAYIRGLAQLRGRNAEWAERAVREAVSLDATEAASQHVVDLVAASLPDLLKQVDGRAVRTSAGDVTLRTA
EATIVTLEPDWRNHFLGVITDPSLALLLLTVGVYALIFEFSTPGMVVPGILGAVCIVVALYGLQMLPINYAGLALIALGL
GCMVAEAFLPTFGALGVGGIVAFVLGAVMLIDTQTPGFGVPLPLIIGLAFVSLTVVLALSSLAVRARRRPIVTGGDTLIG
MTGEVVDVDTPDADADSDGWARIHGERWRVRCDGGIARGDQVRVIARRGLTLMVEPVAPLAASS

Sequences:

>Translated_464_residues
MRPSLRMRRWTGWLAAVIAAVWTSLAVAAAPVVVLPVNGAIGPASAAYVIRGLQQARDRGAQLVVLQMDTPGGLDASMRQ
IIQAILASPVPVAGYVAPGGARAASAGTYILYACHVAAMAPATNLGAASPVAIGMGGHAPSPGDGAKPASAPSASSSNED
TLARKQMHDAAAYIRGLAQLRGRNAEWAERAVREAVSLDATEAASQHVVDLVAASLPDLLKQVDGRAVRTSAGDVTLRTA
EATIVTLEPDWRNHFLGVITDPSLALLLLTVGVYALIFEFSTPGMVVPGILGAVCIVVALYGLQMLPINYAGLALIALGL
GCMVAEAFLPTFGALGVGGIVAFVLGAVMLIDTQTPGFGVPLPLIIGLAFVSLTVVLALSSLAVRARRRPIVTGGDTLIG
MTGEVVDVDTPDADADSDGWARIHGERWRVRCDGGIARGDQVRVIARRGLTLMVEPVAPLAASS
>Mature_464_residues
MRPSLRMRRWTGWLAAVIAAVWTSLAVAAAPVVVLPVNGAIGPASAAYVIRGLQQARDRGAQLVVLQMDTPGGLDASMRQ
IIQAILASPVPVAGYVAPGGARAASAGTYILYACHVAAMAPATNLGAASPVAIGMGGHAPSPGDGAKPASAPSASSSNED
TLARKQMHDAAAYIRGLAQLRGRNAEWAERAVREAVSLDATEAASQHVVDLVAASLPDLLKQVDGRAVRTSAGDVTLRTA
EATIVTLEPDWRNHFLGVITDPSLALLLLTVGVYALIFEFSTPGMVVPGILGAVCIVVALYGLQMLPINYAGLALIALGL
GCMVAEAFLPTFGALGVGGIVAFVLGAVMLIDTQTPGFGVPLPLIIGLAFVSLTVVLALSSLAVRARRRPIVTGGDTLIG
MTGEVVDVDTPDADADSDGWARIHGERWRVRCDGGIARGDQVRVIARRGLTLMVEPVAPLAASS

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 47780; Mature: 47780

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSLRMRRWTGWLAAVIAAVWTSLAVAAAPVVVLPVNGAIGPASAAYVIRGLQQARDRG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
AQLVVLQMDTPGGLDASMRQIIQAILASPVPVAGYVAPGGARAASAGTYILYACHVAAMA
CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
PATNLGAASPVAIGMGGHAPSPGDGAKPASAPSASSSNEDTLARKQMHDAAAYIRGLAQL
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGRNAEWAERAVREAVSLDATEAASQHVVDLVAASLPDLLKQVDGRAVRTSAGDVTLRTA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEE
EATIVTLEPDWRNHFLGVITDPSLALLLLTVGVYALIFEFSTPGMVVPGILGAVCIVVAL
CEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
YGLQMLPINYAGLALIALGLGCMVAEAFLPTFGALGVGGIVAFVLGAVMLIDTQTPGFGV
HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PLPLIIGLAFVSLTVVLALSSLAVRARRRPIVTGGDTLIGMTGEVVDVDTPDADADSDGW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCEEECCCCCCCCCCCCC
ARIHGERWRVRCDGGIARGDQVRVIARRGLTLMVEPVAPLAASS
EEECCCEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MRPSLRMRRWTGWLAAVIAAVWTSLAVAAAPVVVLPVNGAIGPASAAYVIRGLQQARDRG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
AQLVVLQMDTPGGLDASMRQIIQAILASPVPVAGYVAPGGARAASAGTYILYACHVAAMA
CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
PATNLGAASPVAIGMGGHAPSPGDGAKPASAPSASSSNEDTLARKQMHDAAAYIRGLAQL
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGRNAEWAERAVREAVSLDATEAASQHVVDLVAASLPDLLKQVDGRAVRTSAGDVTLRTA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEE
EATIVTLEPDWRNHFLGVITDPSLALLLLTVGVYALIFEFSTPGMVVPGILGAVCIVVAL
CEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
YGLQMLPINYAGLALIALGLGCMVAEAFLPTFGALGVGGIVAFVLGAVMLIDTQTPGFGV
HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PLPLIIGLAFVSLTVVLALSSLAVRARRRPIVTGGDTLIGMTGEVVDVDTPDADADSDGW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCEEECCCCCCCCCCCCC
ARIHGERWRVRCDGGIARGDQVRVIARRGLTLMVEPVAPLAASS
EEECCCEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]