| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927828
Identifier: 187927828
GI number: 187927828
Start: 766724
End: 769585
Strand: Direct
Name: 187927828
Synonym: Rpic_0732
Alternate gene names: NA
Gene position: 766724-769585 (Clockwise)
Preceding gene: 187927823
Following gene: 187927829
Centisome position: 19.45
GC content: 67.54
Gene sequence:
>2862_bases ATGCGTTGGATATTCGGAATCGTGGGTCTGCTGCTCGGAGGCCTGTCGGGGGGCGTCGTCGGGGCGTTCTTTGGGGCGGT GATCGGTCTGGGACTGGCATCGCTGATTTTGTACATGGACAAGCGGGCCAGCGCGCAGTGGGCCAATCCGCCCGACGGCA CGGGCACAACCGGCGCGGGGCAGGGCCATGCGGCCGCGCAGGCAGCCGTGTCGCCGCCGCCCGCGACGCTGCAGGAGCGT GTGGCGCGGCTTGAGCATGAGGTTTCGCTCCTGCGTCGGCAACTGGCTGAAATCAGGGGTGGAACGTTTGCAGCGCCTGC CGATATGGAGGCTTCTGCCGTTGAATCGCCGCCGACCGCGACAGAGGCGTTGCCAGCGGTGGAGGCACTTGCCGCGCCTG TGCCGGCGCCGCAGGTGGCGGTTACGCAGCCGACGCCTCAACCTGTTCCTCAGCCCGTGCCCGTCTTGGCACCGCACGAG CCCGATTGGGTCGAGCGCGCCGTGGGCGCTGCCCGCGACTGGCTGCTGGGCGGCAACAGCGTGGTGCGGGTCGGCATTCT GGTCCTGTTTTTCGGCGTGGCGTTCCTGCTCAAGTACGCGGCGGACAATAGCCTGCTGCCGGTTGAGTTCCGGCTGGCGG GTGTGGCGGTCGGGGCGATCGTGCTGCTCGGCATCGGTTGGCGCCTGCGCGAAAAGCGTCCGGGCTATGCGCTCGTGCTG CAGGGCGGCGGGGTCGGCGTGCTTTATCTGACGGTGTTTGCTGCGACGCGCGTGGTGCCGTTGCTCAGCCCTGGGATGGC GTTTCCGCTGCTGGTGCTGATCTGCGCGCTGGCCGCCGGGCTGGCGGTCAAGCAGAACGCGCCGGCGCTTGCCTTTACCG GCAGCGCGGGCGGATTCCTGGCGCCGATTCTGATCTCGACTGGACAGGGCAGCCACGTGGCGCTGTTCAGCTATTACGCA CTGCTCAACGCAGGCATCTTCGCCATTGCGTGGTTCCGGGCGTGGCGGGCGCTGAATCTGCTCGGCTTTGTCTTTACGTT CGGCATTGCCACGGCGTGGGGCGTGCTGCGCTATCAGCCATCGTTGCTGGCGAGCACCGAGCCGTTCCTGATCCTCTTCT TCCTGATGTATGTGGGCATTGCGCTGCTGACCGCGCTGCGCCGCCATGTCAGCCTCACCAACTACGTTGACGGCACGCTG GTGTTCGGCACGCCGCTGGTGGCAATGGGTTTGCAGACTGGGCTGGTGCACCACATTCCGTTTGCGATGGCGTGGAGCGC CACCGCGCTGGCCGCGTTCTATCTGGGGATTGCGGGCTGGCTGGCGCGGAGGCGTGCCAGCCTTGGCCTGCTGTACGAGG CGATGTTCGCGCTGGGCGTGATCTTCATCACGCTGGCGATCCCGCTGGCTTTCGATGGGCGCACCACCAGTGCGGTCTGG GCGCTGGAAGGGGCCGCTGTGGTGTGGCTGGGCGTGCGCCAGCAGCGGCGGCTGGCGTTGGCGGCAGGCGTGCTCCTGCA ACTTGCGGCGGGCGCCGCCTTCGCCGTGGATGCCGTGTTCGATTGGGCGCCGCAGAGCGGCTGGGCCGTGCTCAACAGCC GCTATATCGGCGGGGTATTGATTGCGCTGGCGGGCGTCTTCAGCGGCTGGCGTCTGCATGGCAAGGCGGAGGTGCGTGCT TGGCTGAAGGCGGCGCCGGTGCTCGGGATTGTCGCGTCGGTGTGGGGCTTGCTGTGGTGGCTCGGCAGCGGCAGCAACGA GATTGATCGCTGGGCCTGGCGCATCGCCAGCAAGACCGTCGACCGGCCGGACATTCCGCTGTATGCCGCCTTTGCCGTGC TGACGGCGTGGGCTGCACACGGCCTGCGCCGCAAGCTCGATTGGGCACTGGCCGAGTGGCCTGCGCTGGCGTTGTCGCCG GTGCTGGCGCTGATTTCGCTGGCTGCGATCGAACACTGGGTGCCCTCTCCGCTGGCCGGGTGGGGCGGGCTGGTGTGGAT TGCGGCCGTGGTGCTGGCCTTCGTGCTGCTGCGCCGCCAGGAACGCGACGTGAAAGACCGCATCCTCGCGCCGCTGCATA CCGTGCTGTTCTGGCTGATCTGCGGCGTACTGGCGACGGAAGGCTACTGGCGCCTCGATGCCTACGTTCCCGAGGGCACC TGGAGTTTTGCCGCCTGGGCTTATGCCTATGGCGCGTTGCTGGCCCTGCTGGCGGGCGCCGGATGGCGCATTCGCTGGCC GATCGCCCGGTTCGAGCGCGCCTACCTGCTGTGGGGTGCCGCGCCGCTGGCTGCCCTGCTGTGGCTATGGAGCCTGGCGA GCGCCGCCAGCGAAGGCAATGCCGCGCCGCTGTTCTACCTGCCGATTCTCAATCCGCTGGACGTGGCGCAACTGCTGGTT TTCCTTGCCATCGCGCTGTGGATGCGCCGCGTGGCGCTGCGCAAGCTCGTGCCTGAGCCGATGGTCATCGGCTACGCCAT CGGCGCGACGCTGTTCATCTGGGCCAACGCGGTGCTGCTGCGCACGCTGCACCACTGGACGCATATTCCGTACACGCTGG ACGATCTGGGGGCCTCGATGCTGGTGCAGGCGTCGCTGTCGATGTTCTGGACGGTGCTGGCGTTGGCGGTGATGGTGTTT GCCACGCGGCGCGCCAGCCGGGCGCTGTGGTTCACCGGCGGAGCGCTGCTGGGCGTGACGGTGGTCAAGCTGTTCCTGTT CGACCTGTCACGCGTCACGGGTGTGGAGCGCATCGTGTCGTTTATCGGGATTGGCGTGCTGCTGTTGTTGATCGGCTATC TGTCGCCGTTGCCGCCAAAGCCCAAAACCAGCGCCGGAGCTGAAACCGGGGAGGTTCTGTGA
Upstream 100 bases:
>100_bases TGCCGGGGCGCATTCCCAACGGCAGCCGTTTGCGGTATACGAGCGGTGCGTGCGCCAGTCGGCGCATGGTTTTCCTATCC AAACGAGGACAATCAGAACG
Downstream 100 bases:
>100_bases AGAAGGTTGCTCTTGCGATGGCTGCGGCGTCGCTGTTGTCTGCGCCGGCCTGGGCCGAACGCTTTGCGTTGACGGGTACG CCCGGCGCCTCGTACTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 953; Mature: 953
Protein sequence:
>953_residues MRWIFGIVGLLLGGLSGGVVGAFFGAVIGLGLASLILYMDKRASAQWANPPDGTGTTGAGQGHAAAQAAVSPPPATLQER VARLEHEVSLLRRQLAEIRGGTFAAPADMEASAVESPPTATEALPAVEALAAPVPAPQVAVTQPTPQPVPQPVPVLAPHE PDWVERAVGAARDWLLGGNSVVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREKRPGYALVL QGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQNAPALAFTGSAGGFLAPILISTGQGSHVALFSYYA LLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQPSLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTL VFGTPLVAMGLQTGLVHHIPFAMAWSATALAAFYLGIAGWLARRRASLGLLYEAMFALGVIFITLAIPLAFDGRTTSAVW ALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVLIALAGVFSGWRLHGKAEVRA WLKAAPVLGIVASVWGLLWWLGSGSNEIDRWAWRIASKTVDRPDIPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSP VLALISLAAIEHWVPSPLAGWGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGT WSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASEGNAAPLFYLPILNPLDVAQLLV FLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLLRTLHHWTHIPYTLDDLGASMLVQASLSMFWTVLALAVMVF ATRRASRALWFTGGALLGVTVVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSPLPPKPKTSAGAETGEVL
Sequences:
>Translated_953_residues MRWIFGIVGLLLGGLSGGVVGAFFGAVIGLGLASLILYMDKRASAQWANPPDGTGTTGAGQGHAAAQAAVSPPPATLQER VARLEHEVSLLRRQLAEIRGGTFAAPADMEASAVESPPTATEALPAVEALAAPVPAPQVAVTQPTPQPVPQPVPVLAPHE PDWVERAVGAARDWLLGGNSVVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREKRPGYALVL QGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQNAPALAFTGSAGGFLAPILISTGQGSHVALFSYYA LLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQPSLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTL VFGTPLVAMGLQTGLVHHIPFAMAWSATALAAFYLGIAGWLARRRASLGLLYEAMFALGVIFITLAIPLAFDGRTTSAVW ALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVLIALAGVFSGWRLHGKAEVRA WLKAAPVLGIVASVWGLLWWLGSGSNEIDRWAWRIASKTVDRPDIPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSP VLALISLAAIEHWVPSPLAGWGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGT WSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASEGNAAPLFYLPILNPLDVAQLLV FLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLLRTLHHWTHIPYTLDDLGASMLVQASLSMFWTVLALAVMVF ATRRASRALWFTGGALLGVTVVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSPLPPKPKTSAGAETGEVL >Mature_953_residues MRWIFGIVGLLLGGLSGGVVGAFFGAVIGLGLASLILYMDKRASAQWANPPDGTGTTGAGQGHAAAQAAVSPPPATLQER VARLEHEVSLLRRQLAEIRGGTFAAPADMEASAVESPPTATEALPAVEALAAPVPAPQVAVTQPTPQPVPQPVPVLAPHE PDWVERAVGAARDWLLGGNSVVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREKRPGYALVL QGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQNAPALAFTGSAGGFLAPILISTGQGSHVALFSYYA LLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQPSLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTL VFGTPLVAMGLQTGLVHHIPFAMAWSATALAAFYLGIAGWLARRRASLGLLYEAMFALGVIFITLAIPLAFDGRTTSAVW ALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVLIALAGVFSGWRLHGKAEVRA WLKAAPVLGIVASVWGLLWWLGSGSNEIDRWAWRIASKTVDRPDIPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSP VLALISLAAIEHWVPSPLAGWGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGT WSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASEGNAAPLFYLPILNPLDVAQLLV FLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLLRTLHHWTHIPYTLDDLGASMLVQASLSMFWTVLALAVMVF ATRRASRALWFTGGALLGVTVVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSPLPPKPKTSAGAETGEVL
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101902; Mature: 101902
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIFGIVGLLLGGLSGGVVGAFFGAVIGLGLASLILYMDKRASAQWANPPDGTGTTGAG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QGHAAAQAAVSPPPATLQERVARLEHEVSLLRRQLAEIRGGTFAAPADMEASAVESPPTA CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH TEALPAVEALAAPVPAPQVAVTQPTPQPVPQPVPVLAPHEPDWVERAVGAARDWLLGGNS HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH VVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREKRPGYALVL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE QGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQNAPALAFTGSAGGFL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH APILISTGQGSHVALFSYYALLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQP HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTLVFGTPLVAMGLQTGLVHHIP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH FAMAWSATALAAFYLGIAGWLARRRASLGLLYEAMFALGVIFITLAIPLAFDGRTTSAVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEE ALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVL EECCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH IALAGVFSGWRLHGKAEVRAWLKAAPVLGIVASVWGLLWWLGSGSNEIDRWAWRIASKTV HHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC DRPDIPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSPVLALISLAAIEHWVPSPLAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC WGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGT CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC WSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASEGN CHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC AAPLFYLPILNPLDVAQLLVFLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLL CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTLHHWTHIPYTLDDLGASMLVQASLSMFWTVLALAVMVFATRRASRALWFTGGALLGVT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH VVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSPLPPKPKTSAGAETGEVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRWIFGIVGLLLGGLSGGVVGAFFGAVIGLGLASLILYMDKRASAQWANPPDGTGTTGAG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QGHAAAQAAVSPPPATLQERVARLEHEVSLLRRQLAEIRGGTFAAPADMEASAVESPPTA CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH TEALPAVEALAAPVPAPQVAVTQPTPQPVPQPVPVLAPHEPDWVERAVGAARDWLLGGNS HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH VVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREKRPGYALVL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE QGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQNAPALAFTGSAGGFL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH APILISTGQGSHVALFSYYALLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQP HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTLVFGTPLVAMGLQTGLVHHIP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH FAMAWSATALAAFYLGIAGWLARRRASLGLLYEAMFALGVIFITLAIPLAFDGRTTSAVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEE ALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVL EECCCEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH IALAGVFSGWRLHGKAEVRAWLKAAPVLGIVASVWGLLWWLGSGSNEIDRWAWRIASKTV HHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC DRPDIPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSPVLALISLAAIEHWVPSPLAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC WGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGT CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC WSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASEGN CHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC AAPLFYLPILNPLDVAQLLVFLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLL CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTLHHWTHIPYTLDDLGASMLVQASLSMFWTVLALAVMVFATRRASRALWFTGGALLGVT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH VVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSPLPPKPKTSAGAETGEVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA