Click here to switch to the map view.

The map label for this gene is 187927785

Identifier: 187927785

GI number: 187927785

Start: 727161

End: 727931

Strand: Direct

Name: 187927785

Synonym: Rpic_0689

Alternate gene names: NA

Gene position: 727161-727931 (Clockwise)

Preceding gene: 187927784

Following gene: 187927786

Centisome position: 18.44

GC content: 66.93

Gene sequence:

>771_bases
ATGGCAGATATCGTGATCGTGGCGAGCGCGTTCGGCGCCGCTCAGGTGCGCGCGCAGGGGCATCACGCCTATGTTCCCCT
GGCCGCGTCGGTCGGCGCAGCCGGCTTCGAGGTGCGGCGTGAATTGTTGCCCGCTGGGCTGGATGGCACGGTATCGGCTG
ACTTACTGACTGCATTGGGCCGCCTGATGGCAGCGCATGGTCTGTGGGCGGTCTATTCCACGCCGGCCGCGCTGTACACG
GACGTCGGCGCTCTGGACACGGTCGCTGTCCGAGGTGCGCTGGTTGAAGCGCAAACCTTGGGTGCGCGCATCGTGAAGTT
CCAGCTTGGCGGCTTTGCCGGCGATGCGTCGGCGGAGTTGCTGGCCCGACTCCTGCGAGGCTGGCGCGCACGGGTGCTGG
TCGAGAACGGTCAACAGGCGGTGGGCGGCTCCCTGGCGCAGTTCCGCAGTTTGTTCGACGCCTTGGAAAGGGCGGATGCG
GCGGACATGCTGGGCATGACGTTCGACGTTGGTAACTGGGAATGGTCGGGCGAAGCGCCGCTGGCGTGCGCGCGGGCCCT
GGCCCCGTACGTCGAATACATCCATTGCAAGAGCGTCGGGGGCGAGGGGGCACGCCGCTTTGCGGTGGCGCCGGCTGGAA
ACGATACGCGGTTCTTGGCTGTGCTGGCGGCATTGCCGGGCGATGTCCCGCGCGGCATCGAATTTCCGTTCGACGCGGTC
GATCCTGTCGCCGATGCCCATCAACACGTCATGTGGCTCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
TCGGCTACCGCCGCTAGGGATTTCCTCTATAGCGCTCAGGATCTGCAGCCACCAACATAGCTCCAATTGGAACCGGTTCC
ATAACGGAAAAAGCGCACAC

Downstream 100 bases:

>100_bases
CGGTGACGCGACATCGAAGGAGCTTACGCATGTCACATACGTTGGATGTCATCACCTACGGCGAAGCCATGGCGATGTTC
GTGGCGACGGCGCCCGGGCC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Epimerase KguE; Sugar Phosphate Isomerase/Epimerase; Sugar Isomerase; Sugar Phosphate Isomerases/Epimerase; Epimerase KguE-Like; Sugar Or Sugar Phosphate Isomerase

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MADIVIVASAFGAAQVRAQGHHAYVPLAASVGAAGFEVRRELLPAGLDGTVSADLLTALGRLMAAHGLWAVYSTPAALYT
DVGALDTVAVRGALVEAQTLGARIVKFQLGGFAGDASAELLARLLRGWRARVLVENGQQAVGGSLAQFRSLFDALERADA
ADMLGMTFDVGNWEWSGEAPLACARALAPYVEYIHCKSVGGEGARRFAVAPAGNDTRFLAVLAALPGDVPRGIEFPFDAV
DPVADAHQHVMWLKAA

Sequences:

>Translated_256_residues
MADIVIVASAFGAAQVRAQGHHAYVPLAASVGAAGFEVRRELLPAGLDGTVSADLLTALGRLMAAHGLWAVYSTPAALYT
DVGALDTVAVRGALVEAQTLGARIVKFQLGGFAGDASAELLARLLRGWRARVLVENGQQAVGGSLAQFRSLFDALERADA
ADMLGMTFDVGNWEWSGEAPLACARALAPYVEYIHCKSVGGEGARRFAVAPAGNDTRFLAVLAALPGDVPRGIEFPFDAV
DPVADAHQHVMWLKAA
>Mature_255_residues
ADIVIVASAFGAAQVRAQGHHAYVPLAASVGAAGFEVRRELLPAGLDGTVSADLLTALGRLMAAHGLWAVYSTPAALYTD
VGALDTVAVRGALVEAQTLGARIVKFQLGGFAGDASAELLARLLRGWRARVLVENGQQAVGGSLAQFRSLFDALERADAA
DMLGMTFDVGNWEWSGEAPLACARALAPYVEYIHCKSVGGEGARRFAVAPAGNDTRFLAVLAALPGDVPRGIEFPFDAVD
PVADAHQHVMWLKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26749; Mature: 26618

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIVIVASAFGAAQVRAQGHHAYVPLAASVGAAGFEVRRELLPAGLDGTVSADLLTALG
CCCEEEEECCCCCHHHEECCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
RLMAAHGLWAVYSTPAALYTDVGALDTVAVRGALVEAQTLGARIVKFQLGGFAGDASAEL
HHHHHHCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHH
LARLLRGWRARVLVENGQQAVGGSLAQFRSLFDALERADAADMLGMTFDVGNWEWSGEAP
HHHHHHHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHCCHHHHHCEEEECCCEECCCCCH
LACARALAPYVEYIHCKSVGGEGARRFAVAPAGNDTRFLAVLAALPGDVPRGIEFPFDAV
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DPVADAHQHVMWLKAA
CHHHHHHHHEEEEECC
>Mature Secondary Structure 
ADIVIVASAFGAAQVRAQGHHAYVPLAASVGAAGFEVRRELLPAGLDGTVSADLLTALG
CCEEEEECCCCCHHHEECCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
RLMAAHGLWAVYSTPAALYTDVGALDTVAVRGALVEAQTLGARIVKFQLGGFAGDASAEL
HHHHHHCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHH
LARLLRGWRARVLVENGQQAVGGSLAQFRSLFDALERADAADMLGMTFDVGNWEWSGEAP
HHHHHHHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHCCHHHHHCEEEECCCEECCCCCH
LACARALAPYVEYIHCKSVGGEGARRFAVAPAGNDTRFLAVLAALPGDVPRGIEFPFDAV
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DPVADAHQHVMWLKAA
CHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA