Click here to switch to the map view.

The map label for this gene is 187927615

Identifier: 187927615

GI number: 187927615

Start: 553265

End: 554398

Strand: Direct

Name: 187927615

Synonym: Rpic_0515

Alternate gene names: NA

Gene position: 553265-554398 (Clockwise)

Preceding gene: 187927614

Following gene: 187927616

Centisome position: 14.03

GC content: 65.96

Gene sequence:

>1134_bases
ATGACCATCCGCCGCACCCTCTGCGCCGCCGCTGCGCTGTTGCTTGCCACCGCAGCCCATGCCGAAATCGTCGTTGGTGT
GAGCCTGTCGACCACAGGTCCGTCGGCGTCGCTCGGCATCACGCAGAAGAACTCGCTGGCGTTCTATCCGGACACCATCG
GCGGGGAAAAGCTGCGCCTCGTGGTGGTGGATGACGCCTCCGACCCGAGCACCGGCACGCGCCTGGCGCGCAAGCTCGTG
ACGGAAGACCACGTCGACATCATCGTTGGCTCATCGGCGGTGGCACCGTCGATTGCGATTGCCGAAGTCGCCACTGAATC
GCACACGCCGCAACTGGCGTTGGCGCCGGTCGAGCTGAAACCGGGCAAGGGCGATTGGACCTACCGGCTTGCGCAGCCGA
TCTCGCTGATGGCCGAGGCGATTGCCACGCGCATGGAGGCGTCCGGCGTCAAGAACGTCGGCTTCATCGGCTTTGCCGAT
GCGTACGGCGAAAGCTGGCTGAAGGACTTCACCGCCGCCGCCACGCCGCGCGGCATCAAGATCGTCGACGTGGAACGCTA
TGCCCGCGCGGATACCAGCGTGACGGGGCAGGTCGCCAAGCTGGTCAGCATCAAGCCGGATGCGATCCTGGTGGCCGGCG
CGGGCACGGGCGCTGCGCTGCCGCACACCGCGTTGCGCGATCGGGGTTATGCGGGGCCGATCTACCAGACGCACGGCGCG
GCGACGAAAGACCTGATCCGCATCGGCGGCAAGGCGGTCGATGGAGCCATCCTGCCGGCAGGCCCGGTGATCGTGGCGGA
GCAATTGCCCGACAGCCACCCGAGCAAAAAGACGGCGCTTGAATACGTGACGCGGTATGAGAAGGCCAACGGCCCCGACA
CGCGCACGCAGTTCGGCGCCCACACGTGGGATGCGCTGCAGGTGCTCCAGCGCATCGTGCCGGTGGCGCTCAAGAAGGCC
AAGCCCGGCACGTCTGAGTTCCGCCAGGCGCTGAAGAACGCGCTGGAATCGGAGCACGACATTGTCGTTTCGCACGGGGT
GCTCAACTACACGGCCACGGATCACTTCGGCTTTGACGCACGTGGCCGTGTGCTGCTGACCATCGACCACGGCAAGTGGA
AATTGCTGAACTGA

Upstream 100 bases:

>100_bases
CGGCTTCGATCCGCAATCGCTGCGCGATCAGCTGCCCATGCCCCGCCGCGCCTGAAAAACCCGTAACGCATTCACACGCC
AGAAGAGAAAAGGGGACCCC

Downstream 100 bases:

>100_bases
CGCGTATGCGCCCGCATGGCCGGCGGGCGCATCGCCGACGATAATCGAGGGGTCCTTCACCCTCGACACCGCCATGCCGC
GCACGCCCAAAGCCGACGAC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Amino Acid ABC Transporter Periplasmic Protein; Branched-Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Transporter

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTIRRTLCAAAALLLATAAHAEIVVGVSLSTTGPSASLGITQKNSLAFYPDTIGGEKLRLVVVDDASDPSTGTRLARKLV
TEDHVDIIVGSSAVAPSIAIAEVATESHTPQLALAPVELKPGKGDWTYRLAQPISLMAEAIATRMEASGVKNVGFIGFAD
AYGESWLKDFTAAATPRGIKIVDVERYARADTSVTGQVAKLVSIKPDAILVAGAGTGAALPHTALRDRGYAGPIYQTHGA
ATKDLIRIGGKAVDGAILPAGPVIVAEQLPDSHPSKKTALEYVTRYEKANGPDTRTQFGAHTWDALQVLQRIVPVALKKA
KPGTSEFRQALKNALESEHDIVVSHGVLNYTATDHFGFDARGRVLLTIDHGKWKLLN

Sequences:

>Translated_377_residues
MTIRRTLCAAAALLLATAAHAEIVVGVSLSTTGPSASLGITQKNSLAFYPDTIGGEKLRLVVVDDASDPSTGTRLARKLV
TEDHVDIIVGSSAVAPSIAIAEVATESHTPQLALAPVELKPGKGDWTYRLAQPISLMAEAIATRMEASGVKNVGFIGFAD
AYGESWLKDFTAAATPRGIKIVDVERYARADTSVTGQVAKLVSIKPDAILVAGAGTGAALPHTALRDRGYAGPIYQTHGA
ATKDLIRIGGKAVDGAILPAGPVIVAEQLPDSHPSKKTALEYVTRYEKANGPDTRTQFGAHTWDALQVLQRIVPVALKKA
KPGTSEFRQALKNALESEHDIVVSHGVLNYTATDHFGFDARGRVLLTIDHGKWKLLN
>Mature_376_residues
TIRRTLCAAAALLLATAAHAEIVVGVSLSTTGPSASLGITQKNSLAFYPDTIGGEKLRLVVVDDASDPSTGTRLARKLVT
EDHVDIIVGSSAVAPSIAIAEVATESHTPQLALAPVELKPGKGDWTYRLAQPISLMAEAIATRMEASGVKNVGFIGFADA
YGESWLKDFTAAATPRGIKIVDVERYARADTSVTGQVAKLVSIKPDAILVAGAGTGAALPHTALRDRGYAGPIYQTHGAA
TKDLIRIGGKAVDGAILPAGPVIVAEQLPDSHPSKKTALEYVTRYEKANGPDTRTQFGAHTWDALQVLQRIVPVALKKAK
PGTSEFRQALKNALESEHDIVVSHGVLNYTATDHFGFDARGRVLLTIDHGKWKLLN

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39817; Mature: 39686

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRRTLCAAAALLLATAAHAEIVVGVSLSTTGPSASLGITQKNSLAFYPDTIGGEKLRL
CCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECCCEEECCCCCCCCEEEE
VVVDDASDPSTGTRLARKLVTEDHVDIIVGSSAVAPSIAIAEVATESHTPQLALAPVELK
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEEC
PGKGDWTYRLAQPISLMAEAIATRMEASGVKNVGFIGFADAYGESWLKDFTAAATPRGIK
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEE
IVDVERYARADTSVTGQVAKLVSIKPDAILVAGAGTGAALPHTALRDRGYAGPIYQTHGA
EEEHHHHHCCCCCHHHHHHHHEEECCCEEEEEECCCCCCCCCHHHHCCCCCCCCEECCCC
ATKDLIRIGGKAVDGAILPAGPVIVAEQLPDSHPSKKTALEYVTRYEKANGPDTRTQFGA
CHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
HTWDALQVLQRIVPVALKKAKPGTSEFRQALKNALESEHDIVVSHGVLNYTATDHFGFDA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCC
RGRVLLTIDHGKWKLLN
CCEEEEEEECCEEEECC
>Mature Secondary Structure 
TIRRTLCAAAALLLATAAHAEIVVGVSLSTTGPSASLGITQKNSLAFYPDTIGGEKLRL
CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEECCCEEECCCCCCCCEEEE
VVVDDASDPSTGTRLARKLVTEDHVDIIVGSSAVAPSIAIAEVATESHTPQLALAPVELK
EEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEEC
PGKGDWTYRLAQPISLMAEAIATRMEASGVKNVGFIGFADAYGESWLKDFTAAATPRGIK
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEE
IVDVERYARADTSVTGQVAKLVSIKPDAILVAGAGTGAALPHTALRDRGYAGPIYQTHGA
EEEHHHHHCCCCCHHHHHHHHEEECCCEEEEEECCCCCCCCCHHHHCCCCCCCCEECCCC
ATKDLIRIGGKAVDGAILPAGPVIVAEQLPDSHPSKKTALEYVTRYEKANGPDTRTQFGA
CHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
HTWDALQVLQRIVPVALKKAKPGTSEFRQALKNALESEHDIVVSHGVLNYTATDHFGFDA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCC
RGRVLLTIDHGKWKLLN
CCEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA