| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927119
Identifier: 187927119
GI number: 187927119
Start: 10376
End: 10744
Strand: Direct
Name: 187927119
Synonym: Rpic_0007
Alternate gene names: NA
Gene position: 10376-10744 (Clockwise)
Preceding gene: 187927117
Following gene: 187927122
Centisome position: 0.26
GC content: 62.6
Gene sequence:
>369_bases ATGCCAAGCAACCAAAGCGGGCACCGCCCCGCGTCTTACCCATCTCCACCCGAACCACCCACCCACGCGCCCACGTCATC CGACACAGGTACGCTCACCAAAAACCGCACCTACCTGAACGGCGCCATCGCAGCGCAGGCGTATCTCAAGCGCACGCGCT CCGCCATGCGCTCACACGGCCAATGCCGCCCGGGCATGCTGCGCGAGCAGCTTCAACATCTGTCCGCGCACGCATTCCCC CCGGCATTTATCAAAGGCTTTGTGGATGCGATTGATGCGTACGTTTCGATGTCGCTTGGGGGCCGCGATGTTGATCCGCA GGCGTGGGATGTATTGGCCGCCATAGAGCGGCGGGGCTACAGCCAATAA
Upstream 100 bases:
>100_bases CGGTTTTCTTTGGGGACCGGTTCGCCAGCCCCGCCGTCGGGCCTGCCACCCTCGTCTGGCGACGGAGTGGTGAGCCTCCT GCAACCCCAAAGAGGCCATC
Downstream 100 bases:
>100_bases CAACAGATTGACGCATTCCCGTGACGGGCGGGAATGCCAAGGTTTTATAGATCACGCCCGACACTTCCCGCGCCCGCCGT CACAGCGGCGCTATTGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPSNQSGHRPASYPSPPEPPTHAPTSSDTGTLTKNRTYLNGAIAAQAYLKRTRSAMRSHGQCRPGMLREQLQHLSAHAFP PAFIKGFVDAIDAYVSMSLGGRDVDPQAWDVLAAIERRGYSQ
Sequences:
>Translated_122_residues MPSNQSGHRPASYPSPPEPPTHAPTSSDTGTLTKNRTYLNGAIAAQAYLKRTRSAMRSHGQCRPGMLREQLQHLSAHAFP PAFIKGFVDAIDAYVSMSLGGRDVDPQAWDVLAAIERRGYSQ >Mature_121_residues PSNQSGHRPASYPSPPEPPTHAPTSSDTGTLTKNRTYLNGAIAAQAYLKRTRSAMRSHGQCRPGMLREQLQHLSAHAFPP AFIKGFVDAIDAYVSMSLGGRDVDPQAWDVLAAIERRGYSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13291; Mature: 13160
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNQSGHRPASYPSPPEPPTHAPTSSDTGTLTKNRTYLNGAIAAQAYLKRTRSAMRSHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QCRPGMLREQLQHLSAHAFPPAFIKGFVDAIDAYVSMSLGGRDVDPQAWDVLAAIERRGY CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SQ CC >Mature Secondary Structure PSNQSGHRPASYPSPPEPPTHAPTSSDTGTLTKNRTYLNGAIAAQAYLKRTRSAMRSHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QCRPGMLREQLQHLSAHAFPPAFIKGFVDAIDAYVSMSLGGRDVDPQAWDVLAAIERRGY CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA