| Definition | Burkholderia phytofirmans PsJN chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_010676 |
| Length | 3,625,999 |
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Identifier: 187921247
GI number:
Start: 2917339
End: 2920113
Strand: Reverse
Name: Not Available
Synonym: Bphyt_6610
Alternate gene names: NA
Gene position: NA
Preceding gene: 187921248
Following gene: 187921246
Centisome position: NA
GC content: NA
Gene sequence:
>2775_bases ATGACCCGGTGGACTGCCCAGACGCGCACCCTCACGTTCAGTGGTGCCGCGCTTCCCGAAATCATCGGCGTCGATTACCG CAGCCGCCAATGCATCGAAATCAGGGAGCCGATGCTCACCGTTCGTCGTCTCCGGGGACGCGAAGCCGTGGGCGAGCTGT TCGAATACGTCGTGGAAACAGAGGTCGAAAACCCGGACTTCCTGCAGGACCCGGAGAGCGTCGCGCAACTCGATCTGGCG GCCATCGTCGGTACATCGGGCACTGTCGCGATCCAGGTCGCTGGCATCGGCACCTTTCGAGCCGGCGCGAAAGGCGACAC GGGGCGCGCGAATGTCGGCGCCGATACGCGCTATATTAATGGGGAAATCGTTTCAGCGCGCATCCGGTGCGTTGAGGATC GCGCGGCGGTTTTCGAGTTCGTATTGCGCCCGTTCGTGTGGCGTGCAACGCTGAATTGCGATTCGCGCATCTTCCACGGT ACCGTAATCGAGGTGCTTGAAGAAGTGCTGCAGCCCTATGTGGGCACCGTCGAGTGGCGCATTGGCGGAATGTGGCCCGG CAAGGGCTATCCACCGCGCGACATGATCCGGCAGGCATGGGAGCCGGACTGGCAATTCGCGTCTTTTTTAATGGAAGAGT TCGGACTCTTCTACTGGTTCGAACACCGTGACGACTTTCACTCCCTTGTCATCTCTGACCTGCTGAGTGGTTTCCGTCCA CATGGCGTAGCCTATGAAACGCTTCGCTATCACACCGGAAGCCGCATTGATGAGGAACACATCAGCGAACTGTCGATCGC GTACACGCTGACACCCGGCAAGGCCACGGTCAACGACCATAACTACGCGGAGCCGCGCCTCGCAAAGAGTCTCGTACCGA ATCGCGAGACCTGTGAGGATACGCGCGGTACAGCGAGCCGGGACATCGAAATCTACGAACCTGCCGACTTCGCCCAGCCC GAGGCGCGGCGCACGGCAGCCGATGCGAACGACGAGCGGGGTGAAGGCCAGCACCTTGCGCGGGTCAAACTCCAGTCGCG GCGCTGCCAAAGTTTGCGCGCAACCGGTAGAGGCCGTCTCCAGGCACTTCAGCCGGGGCGCACGTTCACGCTTGCGGGCT ATCCGCAGGAGCGCGCGAACTGTGAATACATCGTTCTGAGTTGCGATCTGGACATGACTGAAGTCGGCACGTCGTCGGGT CCGACGCGTCAGTACACGGTCAACACGGAGTTTGAACTGCAACCGGCCAACGAGTATTTCCGGCTGCCCCAAGTCACGCC CCGGCCGCGCATCGACGGCTATGAATATGCCGTGGTGGTCGCGCCGCAGGACAAGGAAATGTACATCGACTACCGCAACC GGCTGCGCATCCAGTTCGACTGGGACCGGCAGGCGAATCTCGATGGCGCGACTTCGATCTGGGTGCGCGTCATGACGCAA TGGCAGGGTGGCGAGCTGGGCGTGGTTGCACCCGGTCGCGCGGGTCAGATGGTGCTGGTGTCGCACGTGCACGGTGACCC GGACCGGCCTGTCGTCGCCGGATTCGTGGTGGACAAGTTCAACATGCCGCCGTGGGAACTGCCGGCCAATGCTGCGTTGA GCGGCATGCGCAGCAAGAGTCTTGGGTATGGTCTGCGCTCCAATCATCTCGCGTTGGACGATACACCCGGCAAGATGCAG GCGCAGCTCGCAAGCGACCAGGCGAATTCGCGGTTTGTAGCGGGCTTCAACACGCGCATTGATGGCACGAAGGGGCGCAC CGAGGCGCGGGGTGAAGGGATCGAGATTGCCACCGATGCGCACCTTGTAGGCCGGGGCAACCAGGGCGTGCTGCTTACCT CCGAGGCGCGTGTGGGCGCTAGCGCTCCCGTAAAGGATATGGGCGAGACAGTGGCGCGGCTCACGCAGGCGCGGCAGCAG CATGAGGACCTGTCACGGCTGGCGATTCAGCACAACGCGCAGACGATGGACGCTAGCCAGGGCGATGCCACGAGCATGAT CAAAGCGCAGAACGAAGCAATCCGGGGTGGACAGAAGACGGAGGAGAATCCATCGCCCGAAATGACGCGGCCGGACGTGG TGCTGGCGAGTGCGGCGGGGATTGCGACAACTGCGGCAGACAGCACGCACATGGCGAGCGTGAAGGATCACGCGATTACA GCAGGGCGGGACGTGAGTGTGTCGTCGGGGCGCTCGCTGTTTGCGTCGGTGCGCGGTGCGATCAGCCTGTTTGCCTACCA GCTTGGGCTGAAACTAATCGCGGCGAAGGGCAAGGTGGACATCCAGGCGCAAAGCGACCAGATGGCGCTGGCGGCACTCA ATGACCTTACGATCAGCAGCACCGATGGCAGGATCGTGCTGACGGCGGCAAAGGAAATCTGGCTCGGTGCAGGCGGGTCG TACATCCAGATCGACGGTAGCGGGATCATCAACGGGTCGCCGGGGGCAATTCTGGAGAGAGGTGCCACCTGGGACGTGCC AGGGCCGGATACACAGCGCGTGCGTGTGCCTGATCTCCCGGGAGACAAGATCCACAGTGCGCAATTTGTTGTCCGCGACC GTAGCGGCAACCCGTTGCCTAACTACCCCTATCAGATCAAGACGGAAAACGGCCCGACCTGGTTTGGGCGCACAGATGAG CATGGACATACAGAGCGGGTCTGGACGGCAAGCCCCCAGGATGTCGCCGTGTATCCCGCTCACGAAATGGACGATGCAGA TGAAGAGGGCGCGAAGGACAACTGCTGCGACGTTAAACCTTCAAAATACGAGTAA
Upstream 100 bases:
>100_bases TGATCCAACCGCGTACGCCGGAAGTTACCGGCGATGCGCGGACGCAATGGTTGTCCAAACCGCTTCCCACTGTTTCCTGG CCCGCTGACGCGAGGCACGC
Downstream 100 bases:
>100_bases CTAATGCCAGCTACCCCTCAGACTTCATCCGCAATCATGGCAACCGCCCAGGACATGCCAACGTATGACGTGACGGTTAC CGATCGCGTAGTCAGTTTTA
Product: type VI secretion system Vgr family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>924_residues MTRWTAQTRTLTFSGAALPEIIGVDYRSRQCIEIREPMLTVRRLRGREAVGELFEYVVETEVENPDFLQDPESVAQLDLA AIVGTSGTVAIQVAGIGTFRAGAKGDTGRANVGADTRYINGEIVSARIRCVEDRAAVFEFVLRPFVWRATLNCDSRIFHG TVIEVLEEVLQPYVGTVEWRIGGMWPGKGYPPRDMIRQAWEPDWQFASFLMEEFGLFYWFEHRDDFHSLVISDLLSGFRP HGVAYETLRYHTGSRIDEEHISELSIAYTLTPGKATVNDHNYAEPRLAKSLVPNRETCEDTRGTASRDIEIYEPADFAQP EARRTAADANDERGEGQHLARVKLQSRRCQSLRATGRGRLQALQPGRTFTLAGYPQERANCEYIVLSCDLDMTEVGTSSG PTRQYTVNTEFELQPANEYFRLPQVTPRPRIDGYEYAVVVAPQDKEMYIDYRNRLRIQFDWDRQANLDGATSIWVRVMTQ WQGGELGVVAPGRAGQMVLVSHVHGDPDRPVVAGFVVDKFNMPPWELPANAALSGMRSKSLGYGLRSNHLALDDTPGKMQ AQLASDQANSRFVAGFNTRIDGTKGRTEARGEGIEIATDAHLVGRGNQGVLLTSEARVGASAPVKDMGETVARLTQARQQ HEDLSRLAIQHNAQTMDASQGDATSMIKAQNEAIRGGQKTEENPSPEMTRPDVVLASAAGIATTAADSTHMASVKDHAIT AGRDVSVSSGRSLFASVRGAISLFAYQLGLKLIAAKGKVDIQAQSDQMALAALNDLTISSTDGRIVLTAAKEIWLGAGGS YIQIDGSGIINGSPGAILERGATWDVPGPDTQRVRVPDLPGDKIHSAQFVVRDRSGNPLPNYPYQIKTENGPTWFGRTDE HGHTERVWTASPQDVAVYPAHEMDDADEEGAKDNCCDVKPSKYE
Sequences:
NA
Specific function: NA
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA