Click here to switch to the map view.

The map label for this gene is cpsA1 [H]

Identifier: 187935693

GI number: 187935693

Start: 2952383

End: 2953564

Strand: Reverse

Name: cpsA1 [H]

Synonym: CLL_A2874

Alternate gene names: 187935693

Gene position: 2953564-2952383 (Counterclockwise)

Preceding gene: 187933574

Following gene: 187934776

Centisome position: 77.72

GC content: 32.4

Gene sequence:

>1182_bases
GTGATAGATTTCAAAAAAGAAGCTAATGATATAAAAGAAGAATTAATTTCAATAAGACGAGATATACATGAACATCCAGA
AGTTGGCTTTGAAGTACACAGAACTTCAGAACTTATAAAAAACTTTTTAAAGGCAGAAGGTATTGAATATAGAGAGGTAT
CAAAAACTGGAGTTTGTGGAATCATAAAGGGAGAAAAAATAGGTAGCAACAAGACTATAGCAATAAGAGGAGATATGGAT
GCACTTCCTATCCAAGATATGAAATCTTGTGAATATAGCTCAAAAGTAAATGGGAAAATGCATGCATGTGGACATGATGC
TCATACAACAATACTTTTAGGTGTAGCTAAAATATTAAATAAATATAAAAGTCAATTTAGTGGAAATATAAAACTATTAT
TTGAGCCTGCTGAAGAAACTGTTGGTGGAGCTCAATATATGATACAAGAAGGAGTTCTAGAAAATCCCAAAGTTGATTAT
GTGCTAGGTCTTCATGTTGATGAAAATGTAGGTATTGGAAATATAGAGGTTAGAAAGGGTGTTGTTAATGCCGCATCTAA
CCCATTTAAAATAAAAATCACAGGTCAAGGGGGACATGGAGCAGCACCACATACAACAATTGATCCTATTGTTGTAGCTA
GTCATATAGTGGTTGCACTTCAAAGCATAGTGAGTAGAGAAATAGCACCTGTAAATCCAGCAGTAATTACTATTGGTACA
ATAAATGGGGGAACTGCTCAAAATATTATTCCTGGAGAAGTTACATTAAGTGGAATAATTAGAACGATGACAAAAGAAGA
TAGGCTATTTGCAAGTGAAAGATTAAAAGAGATTGTTAATGGAATTGCTTTATCTTCAAGAGCAAAAGCTGAGATAGAAA
TAGAAGAAAGCTATCCATGTCTGTACAATGATAATTATATGGTAGAATTACTAAGGGATTCTGCAAGTAATATATTAAAA
AGTGAAAATGTACTTGAACAAAAAGCACCACATATGGGGGTAGAAAGTTTTGCATATTTTGCACTTGAAAGACCTGGAGT
ATTTTATTTCTTAGGATCAGGGAATAAACAAAAGAAAACTACTGAACCTGCACATAGCAGTTTATTTAATATAGATGAAG
ATTGTATACCACTTGGTGTAGCAATTCAGTGTTTAACAGCATTTAATTATTTAACAAAATAA

Upstream 100 bases:

>100_bases
AAGTTAATGGAGAAAATTCATCATATACAGCTAGAATAGTTGAAGGTGATGTTATAGAAGTTTATTGGTCATAATATCTT
AAGAAAGGAAGTGTATGTTT

Downstream 100 bases:

>100_bases
CCAAAAGAAAAAATTATAGGAGTGATAATATTTGAAAATCGAAATAGGAGCTAATGAAGCCGGTCAAAGATTAGATAAAT
TTTTAAGAAAGTTATTAAAG

Product: thermostable carboxypeptidase 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MIDFKKEANDIKEELISIRRDIHEHPEVGFEVHRTSELIKNFLKAEGIEYREVSKTGVCGIIKGEKIGSNKTIAIRGDMD
ALPIQDMKSCEYSSKVNGKMHACGHDAHTTILLGVAKILNKYKSQFSGNIKLLFEPAEETVGGAQYMIQEGVLENPKVDY
VLGLHVDENVGIGNIEVRKGVVNAASNPFKIKITGQGGHGAAPHTTIDPIVVASHIVVALQSIVSREIAPVNPAVITIGT
INGGTAQNIIPGEVTLSGIIRTMTKEDRLFASERLKEIVNGIALSSRAKAEIEIEESYPCLYNDNYMVELLRDSASNILK
SENVLEQKAPHMGVESFAYFALERPGVFYFLGSGNKQKKTTEPAHSSLFNIDEDCIPLGVAIQCLTAFNYLTK

Sequences:

>Translated_393_residues
MIDFKKEANDIKEELISIRRDIHEHPEVGFEVHRTSELIKNFLKAEGIEYREVSKTGVCGIIKGEKIGSNKTIAIRGDMD
ALPIQDMKSCEYSSKVNGKMHACGHDAHTTILLGVAKILNKYKSQFSGNIKLLFEPAEETVGGAQYMIQEGVLENPKVDY
VLGLHVDENVGIGNIEVRKGVVNAASNPFKIKITGQGGHGAAPHTTIDPIVVASHIVVALQSIVSREIAPVNPAVITIGT
INGGTAQNIIPGEVTLSGIIRTMTKEDRLFASERLKEIVNGIALSSRAKAEIEIEESYPCLYNDNYMVELLRDSASNILK
SENVLEQKAPHMGVESFAYFALERPGVFYFLGSGNKQKKTTEPAHSSLFNIDEDCIPLGVAIQCLTAFNYLTK
>Mature_393_residues
MIDFKKEANDIKEELISIRRDIHEHPEVGFEVHRTSELIKNFLKAEGIEYREVSKTGVCGIIKGEKIGSNKTIAIRGDMD
ALPIQDMKSCEYSSKVNGKMHACGHDAHTTILLGVAKILNKYKSQFSGNIKLLFEPAEETVGGAQYMIQEGVLENPKVDY
VLGLHVDENVGIGNIEVRKGVVNAASNPFKIKITGQGGHGAAPHTTIDPIVVASHIVVALQSIVSREIAPVNPAVITIGT
INGGTAQNIIPGEVTLSGIIRTMTKEDRLFASERLKEIVNGIALSSRAKAEIEIEESYPCLYNDNYMVELLRDSASNILK
SENVLEQKAPHMGVESFAYFALERPGVFYFLGSGNKQKKTTEPAHSSLFNIDEDCIPLGVAIQCLTAFNYLTK

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=447, Percent_Identity=24.1610738255034, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787598, Length=312, Percent_Identity=25.6410256410256, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 43007; Mature: 43007

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFKKEANDIKEELISIRRDIHEHPEVGFEVHRTSELIKNFLKAEGIEYREVSKTGVCG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCEE
IIKGEKIGSNKTIAIRGDMDALPIQDMKSCEYSSKVNGKMHACGHDAHTTILLGVAKILN
EEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
KYKSQFSGNIKLLFEPAEETVGGAQYMIQEGVLENPKVDYVLGLHVDENVGIGNIEVRKG
HHHHHHCCCEEEEEECCHHHCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECC
VVNAASNPFKIKITGQGGHGAAPHTTIDPIVVASHIVVALQSIVSREIAPVNPAVITIGT
HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
INGGTAQNIIPGEVTLSGIIRTMTKEDRLFASERLKEIVNGIALSSRAKAEIEIEESYPC
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
LYNDNYMVELLRDSASNILKSENVLEQKAPHMGVESFAYFALERPGVFYFLGSGNKQKKT
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEEEECCCCCCCCC
TEPAHSSLFNIDEDCIPLGVAIQCLTAFNYLTK
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDFKKEANDIKEELISIRRDIHEHPEVGFEVHRTSELIKNFLKAEGIEYREVSKTGVCG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCHHHHCCCCCEE
IIKGEKIGSNKTIAIRGDMDALPIQDMKSCEYSSKVNGKMHACGHDAHTTILLGVAKILN
EEECCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
KYKSQFSGNIKLLFEPAEETVGGAQYMIQEGVLENPKVDYVLGLHVDENVGIGNIEVRKG
HHHHHHCCCEEEEEECCHHHCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEECC
VVNAASNPFKIKITGQGGHGAAPHTTIDPIVVASHIVVALQSIVSREIAPVNPAVITIGT
HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
INGGTAQNIIPGEVTLSGIIRTMTKEDRLFASERLKEIVNGIALSSRAKAEIEIEESYPC
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
LYNDNYMVELLRDSASNILKSENVLEQKAPHMGVESFAYFALERPGVFYFLGSGNKQKKT
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCEEEEECCCCCCCCC
TEPAHSSLFNIDEDCIPLGVAIQCLTAFNYLTK
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]