| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935575
Identifier: 187935575
GI number: 187935575
Start: 2855143
End: 2855856
Strand: Reverse
Name: 187935575
Synonym: CLL_A2760
Alternate gene names: NA
Gene position: 2855856-2855143 (Counterclockwise)
Preceding gene: 187935554
Following gene: 187934551
Centisome position: 75.15
GC content: 28.57
Gene sequence:
>714_bases ATGAGTAATATACAAATATTTAATAATGAAGATTTAAAGTTAAAAGTTAGAACAATTCAAAATGGTGATGGAAGTATTTC AATTAATGCTGAGGATACTGCAATAGGATTTGGATGGTATGAAGAAAAAGCTGGGAAGATATATCCAAGATGGAGAACAA TCAACGGGTATATTAAGGAATTTGGATTTTCGCAAGATGTTGCGAAAGAAGATTATATTCCAGAAAGTTTATTTTATATG CTAGGAATGAAAGCAAATAATAAAGTAGCTCAAGATTTTCAAAAGTGGTTGGCAACAAAAGTTATTCCTTCTGTAAGAAA AACAGGATCATATCAACTTCCTAAAATATCTAAGGAATTACAAGCTATTTTTATGATAGATGGAAAGCAACAAAGGCTAG AAAATGAAGTAAAGGATCTAAAAGACAATATGCCATTATTTAATATAGATTGTGAAGAACTTCAAAAAGTAGTCAAAAAG AAGGCAGTTAAATGTTTAGGAGGATATAACAGAAAAGCTTATTATGATAAATCATTAAGAGCTAGAGTATTTGGAGATAT ACAAAGAGAAATAAAAAGGCAGTTTGAGGTTAATAGCTATAAAGCAATAAAAAGAAGTCAATTAGAGATAGCCAAGGAAA TAGTAGATAAATATGAAGTACCATTTGTTCTTAAAGATGAAATAACATTAGTAAATAATCAAATAGCTATGTAG
Upstream 100 bases:
>100_bases TAGAAAAGTAAAAAACTCAATATGAGAGTATAAAAATACTATGATACTAGTTTTACATTCTCATATGATAATTAATTGAT AATGGGAAGGAGAAAAATAA
Downstream 100 bases:
>100_bases GAGTTGATATTATGACTGCAAAAGAACTAGCTGCTAAAACAGTAAGAGATATTGCTAAAAGAAGAGAGCGTAAAGAAAAT GAATTTCTTGCTTATCAAAA
Product: BRO domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKEFGFSQDVAKEDYIPESLFYM LGMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKELQAIFMIDGKQQRLENEVKDLKDNMPLFNIDCEELQKVVKK KAVKCLGGYNRKAYYDKSLRARVFGDIQREIKRQFEVNSYKAIKRSQLEIAKEIVDKYEVPFVLKDEITLVNNQIAM
Sequences:
>Translated_237_residues MSNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKEFGFSQDVAKEDYIPESLFYM LGMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKELQAIFMIDGKQQRLENEVKDLKDNMPLFNIDCEELQKVVKK KAVKCLGGYNRKAYYDKSLRARVFGDIQREIKRQFEVNSYKAIKRSQLEIAKEIVDKYEVPFVLKDEITLVNNQIAM >Mature_236_residues SNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKEFGFSQDVAKEDYIPESLFYML GMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKELQAIFMIDGKQQRLENEVKDLKDNMPLFNIDCEELQKVVKKK AVKCLGGYNRKAYYDKSLRARVFGDIQREIKRQFEVNSYKAIKRSQLEIAKEIVDKYEVPFVLKDEITLVNNQIAM
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27531; Mature: 27400
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE CCCEEEECCCCCEEEEEEEECCCCEEEEECCCCEEECCEECCCCCCCCCCEEHHHHHHHH FGFSQDVAKEDYIPESLFYMLGMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKEL CCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QAIFMIDGKQQRLENEVKDLKDNMPLFNIDCEELQKVVKKKAVKCLGGYNRKAYYDKSLR EEEEEECCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHH ARVFGDIQREIKRQFEVNSYKAIKRSQLEIAKEIVDKYEVPFVLKDEITLVNNQIAM HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCEECC >Mature Secondary Structure SNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE CCEEEECCCCCEEEEEEEECCCCEEEEECCCCEEECCEECCCCCCCCCCEEHHHHHHHH FGFSQDVAKEDYIPESLFYMLGMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKEL CCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QAIFMIDGKQQRLENEVKDLKDNMPLFNIDCEELQKVVKKKAVKCLGGYNRKAYYDKSLR EEEEEECCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHH ARVFGDIQREIKRQFEVNSYKAIKRSQLEIAKEIVDKYEVPFVLKDEITLVNNQIAM HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA