| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935554
Identifier: 187935554
GI number: 187935554
Start: 2855946
End: 2856977
Strand: Reverse
Name: 187935554
Synonym: CLL_A2761
Alternate gene names: NA
Gene position: 2856977-2855946 (Counterclockwise)
Preceding gene: 187934545
Following gene: 187935575
Centisome position: 75.18
GC content: 28.29
Gene sequence:
>1032_bases ATGGAATATATAAATGACATTAATATAAATCAAGCTGTAATTCATGTACTAGATAGAAATGCAACAGAACCTGTTTTAAA TGAATTTACTTTAGAACTAAATGAAGAAGTGTACAAGTTCTTATATAAGCATATAGAAAAGTGTTTAAAAGATGATGAGT TAAAGTATGCTAAATTCAAACAAGGCACTAACTTAGTAAAAGAAACTGTACAAGGATATTTAAATGGAATAGATGATGAG TTTATAGGGTTATCAAAAAGATTAGCAAAACAATTATTTGCTATCATGCAAATGGATGAAAGCATAGATTCATGTGATTT GATTATAGTCTCTTTAACTACAGATCAAGGACCAATGATTGGAATACTAAAATTGGATTATGTAAAGAACTTTACTCATG AAATTCAATTTATAGATGAAAAAATAAGGGTAGGAATAGTACCACAGATTGCAGGCCTACCAGGGAGTAGTCAAAAAATA GAAAAGGCTGCTTTTATAAAACCATATCGAGAAGATAATCTGTTTAATCTTTATGTCTTAGATAAGAAGAAGAGAACTAA GGAAGATGCAGAGTTAAGAATTAATTATTTCGTAGCATATTATTTATACTCAACACTTATCACTAATGAGAGAGACAATA CAAAAAGTTTTATAAATAATTCTGAGAATTGGATAAGAAAAAATGTGCAAAGTGCAGAGGATCAACAAAAAATAAGAGAT TCTTTTAAAAACAAAGTTATAGAAGAGGACATTATAAATATAGAAGAAGTTGCAAAAGAAGTATTAAAAGAACCAGGAGC AGCAGACAATTTTAAAGTGTATATGGCTGGAAGTTGTGAAAAAGAATTTGGAGTAGACAAGACTTATGTTGAGAAGAAAG TTAAAAAAGTAAGACTTAATATAGACAGAGAAATAGATTTATATATATCAAACGTAGCCTATAATGACCAGGATAAATTC GATATAGTTCCTAACGGTGATGGAAGTGTGAATATGATAATTAAAAATGTTATGAGCTATATAGAAAAGTAA
Upstream 100 bases:
>100_bases ACTACGCCAACTACAACTCAAATATATGCACAACTTTCACAAGAAAACTTGAAAAATGAATATAGAAGATTGGTAGGTTA ATAATTTAGGAGGAAAGATA
Downstream 100 bases:
>100_bases AAAACTCAATATGAGAGTATAAAAATACTATGATACTAGTTTTACATTCTCATATGATAATTAATTGATAATGGGAAGGA GAAAAATAAATGAGTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MEYINDININQAVIHVLDRNATEPVLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFKQGTNLVKETVQGYLNGIDDE FIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMIGILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKI EKAAFIKPYREDNLFNLYVLDKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD SFKNKVIEEDIINIEEVAKEVLKEPGAADNFKVYMAGSCEKEFGVDKTYVEKKVKKVRLNIDREIDLYISNVAYNDQDKF DIVPNGDGSVNMIIKNVMSYIEK
Sequences:
>Translated_343_residues MEYINDININQAVIHVLDRNATEPVLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFKQGTNLVKETVQGYLNGIDDE FIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMIGILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKI EKAAFIKPYREDNLFNLYVLDKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD SFKNKVIEEDIINIEEVAKEVLKEPGAADNFKVYMAGSCEKEFGVDKTYVEKKVKKVRLNIDREIDLYISNVAYNDQDKF DIVPNGDGSVNMIIKNVMSYIEK >Mature_343_residues MEYINDININQAVIHVLDRNATEPVLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFKQGTNLVKETVQGYLNGIDDE FIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMIGILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKI EKAAFIKPYREDNLFNLYVLDKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD SFKNKVIEEDIINIEEVAKEVLKEPGAADNFKVYMAGSCEKEFGVDKTYVEKKVKKVRLNIDREIDLYISNVAYNDQDKF DIVPNGDGSVNMIIKNVMSYIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39772; Mature: 39772
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYINDININQAVIHVLDRNATEPVLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFK CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QGTNLVKETVQGYLNGIDDEFIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE GILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKIEKAAFIKPYREDNLFNLYVL EEEEHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEE DKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHH SFKNKVIEEDIINIEEVAKEVLKEPGAADNFKVYMAGSCEKEFGVDKTYVEKKVKKVRLN HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHC IDREIDLYISNVAYNDQDKFDIVPNGDGSVNMIIKNVMSYIEK CCCEEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEYINDININQAVIHVLDRNATEPVLNEFTLELNEEVYKFLYKHIEKCLKDDELKYAKFK CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QGTNLVKETVQGYLNGIDDEFIGLSKRLAKQLFAIMQMDESIDSCDLIIVSLTTDQGPMI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE GILKLDYVKNFTHEIQFIDEKIRVGIVPQIAGLPGSSQKIEKAAFIKPYREDNLFNLYVL EEEEHHHHHHHHHHHHHHHHHHHEEECHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEE DKKKRTKEDAELRINYFVAYYLYSTLITNERDNTKSFINNSENWIRKNVQSAEDQQKIRD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCHHHHHHHHH SFKNKVIEEDIINIEEVAKEVLKEPGAADNFKVYMAGSCEKEFGVDKTYVEKKVKKVRLN HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHC IDREIDLYISNVAYNDQDKFDIVPNGDGSVNMIIKNVMSYIEK CCCEEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA