Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187935524

Identifier: 187935524

GI number: 187935524

Start: 2004463

End: 2005062

Strand: Reverse

Name: 187935524

Synonym: CLL_A1914

Alternate gene names: NA

Gene position: 2005062-2004463 (Counterclockwise)

Preceding gene: 187934889

Following gene: 187932879

Centisome position: 52.76

GC content: 32.67

Gene sequence:

>600_bases
ATGAAAAAAGTAGATTTATTAAAGTTAGTTGAAGCGATAGCAGATGATGGGGACATAAACGAATCCCTTTTAGGACATGA
AGAGTTTAAAGGGTTAAAGGACTTATCTAAGCTAGGTGCTGATGATATCAATGGAATATTAACAGGGGAAGTTGGAAAGG
CTTATATGACTTCACATGATGATTCTATTAGGTCTAAAGCTGTTGAAACTTTTAAAACTGGCAAAATGCAAGAAGAAATT
AAAAAAGCAGTTGATGCTGCAACTAATAAAAAGAAAACACCAGAAATGGAACGTATTGAAGCATTAGAAAAGAAAAATGC
AGAACTTGAAGCTAAAGATTTAAGAAATGCTACTAATGGCACTATAGGAAAACTGTTAAAAGATAAGAAATTACCTAGTG
AATTGATTAATTTAGTTTATGGGGATGGCAAAGAAGAAACTTTTACAAAAAACATTGATGCAATTGAAAATATTATTAAC
AGTGCAGCAGATTCAAAAGTAAATGAAAGACTTGGATCAAGTGCATATATTCCACCATCAGGTGGGCAAACTGCAGAAGC
TCTTAATGCACAAATTGCTAGTGCGATAGGAGTTAAATAA

Upstream 100 bases:

>100_bases
TAATAATTGACTTTAAGCAATAGTCATTAAACAGGCTTATTTTTATGCAAAAATTTATACTCTAAGGGCAAGTACTTTAG
GGGATAGGAGGAATATAACA

Downstream 100 bases:

>100_bases
TTAAAAATAAAATTAATAAAGGAATGGTGATGTGAAATGGCAAATAGTATAGCAACAGCAACTTTAATTCAAAAAAACTT
AGATAAGGCAGCAGCACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKVDLLKLVEAIADDGDINESLLGHEEFKGLKDLSKLGADDINGILTGEVGKAYMTSHDDSIRSKAVETFKTGKMQEEI
KKAVDAATNKKKTPEMERIEALEKKNAELEAKDLRNATNGTIGKLLKDKKLPSELINLVYGDGKEETFTKNIDAIENIIN
SAADSKVNERLGSSAYIPPSGGQTAEALNAQIASAIGVK

Sequences:

>Translated_199_residues
MKKVDLLKLVEAIADDGDINESLLGHEEFKGLKDLSKLGADDINGILTGEVGKAYMTSHDDSIRSKAVETFKTGKMQEEI
KKAVDAATNKKKTPEMERIEALEKKNAELEAKDLRNATNGTIGKLLKDKKLPSELINLVYGDGKEETFTKNIDAIENIIN
SAADSKVNERLGSSAYIPPSGGQTAEALNAQIASAIGVK
>Mature_199_residues
MKKVDLLKLVEAIADDGDINESLLGHEEFKGLKDLSKLGADDINGILTGEVGKAYMTSHDDSIRSKAVETFKTGKMQEEI
KKAVDAATNKKKTPEMERIEALEKKNAELEAKDLRNATNGTIGKLLKDKKLPSELINLVYGDGKEETFTKNIDAIENIIN
SAADSKVNERLGSSAYIPPSGGQTAEALNAQIASAIGVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21473; Mature: 21473

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVDLLKLVEAIADDGDINESLLGHEEFKGLKDLSKLGADDINGILTGEVGKAYMTSHD
CCHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHCCHHHCCEEECCCCHHHHHCCC
DSIRSKAVETFKTGKMQEEIKKAVDAATNKKKTPEMERIEALEKKNAELEAKDLRNATNG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCH
TIGKLLKDKKLPSELINLVYGDGKEETFTKNIDAIENIINSAADSKVNERLGSSAYIPPS
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGQTAEALNAQIASAIGVK
CCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVDLLKLVEAIADDGDINESLLGHEEFKGLKDLSKLGADDINGILTGEVGKAYMTSHD
CCHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHCCHHHCCEEECCCCHHHHHCCC
DSIRSKAVETFKTGKMQEEIKKAVDAATNKKKTPEMERIEALEKKNAELEAKDLRNATNG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCH
TIGKLLKDKKLPSELINLVYGDGKEETFTKNIDAIENIINSAADSKVNERLGSSAYIPPS
HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGQTAEALNAQIASAIGVK
CCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA