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The map label for this gene is cbiD [H]

Identifier: 187935411

GI number: 187935411

Start: 3016716

End: 3017861

Strand: Reverse

Name: cbiD [H]

Synonym: CLL_A2936

Alternate gene names: 187935411

Gene position: 3017861-3016716 (Counterclockwise)

Preceding gene: 187933185

Following gene: 187935724

Centisome position: 79.41

GC content: 29.84

Gene sequence:

>1146_bases
ATGTTTGAAATGTATATTGAAAGTGGAATGAATAAGTTAAGATGTGGATATACAACAGGATCATGTGCTACAGGAGCAGC
TAAGGCAGCAACTATGCTACTTTTTGACTTGATAAATAGCGAAGAAGAGCTAAATGAAATAGAAATAGATACTCCAAAAG
GTATAAAAGTTGAAATGCCAATTGACCATGTTGTGGTAGGAAAAAATTTTGTTCAATGTACCATATTAAAATTTAGCGGT
GATGATAAAGATATCACAATGGGATTAGAGATACAGGCAACAGTAGAAAAGATAAGTAAAGAAGAAGCAGAAGAATTATC
TAAAAAGTTAATAAGTAATGAAAGCAAGATTATTGTATTAGATGGTGGAATTGGTGTTGGAAGAGTTACAAAAGATGGAT
TATTCGTAGCAAAGGGAGAGCCAGCTATAAATCCAGTTCCAAGACAAATGATAATAAAAGAGATTGAAAGTATTCTACCT
AAAGATAAATATGTAAAAGTTATAATTTCTGTTCCACAAGGTACAGAAATAGGTAAAAAGACTTTTAATCCAAGGCTTGG
TATAGAAGGTGGAATATCTATATTAGGTACATCAGGAATAGTATATCCAATGTCAGAAGATGCATTAAAAGCTTCTATAA
AGCTAGAGATAAAACAAAAGTCTTTAAAAAATAAAAATCTTATACTAACCTTTGGAAACTTAGGCGAAAATTATTGCAAA
AGTTTAGGTTATATAGAAGAAGAAATTATTATATGTTCAAATTTTATAGGTTTTGCATTAGAATGTTGTGTTTCCTGTAA
AGTTAAAAGTATCCTTATAGTTGGACATATAGGAAAGATGAGTAAGATAGCTTATGGATGTTTTAATACACATAGTAGAG
TGTGTGGAGTAAGACTTGAAGTTTTAGCTTTAGAATTAACACTTTTAGGATATGATGTCTCTTTAGTAAATAAGGTTCTG
AATGAAAAAACTTGTGAAGGCGCTGTAAAGTTATTAGGTAGCGGTTATGAAAACTTATATAAAAATATAGGTAAAAAAAT
ATTAAATAGTATGAAAACTTACGTTTATGATGAGCTAAAAATAGATGCAGTTATGTATTATGGTGCATCAAATCCAATAT
TACTTTGGAGTTCATGTTTGGAGTGA

Upstream 100 bases:

>100_bases
CCATTAGCGCTGGCTTTTGGAATTAGCTTTTTTGACTTGTTATGGGAAAATATAAATGAGTAAGTGCATTTCATGTACCA
AAATTAAGAGGTGAGTTTCT

Downstream 100 bases:

>100_bases
TAAATATATGTTATTTGTAGTTGGACTTGGTCCAGGTCATGAAGATTATATTATAAAAAAAGCAGAAAGTGTATTAAAAA
GTTCAGATGTAATTATAGGG

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MFEMYIESGMNKLRCGYTTGSCATGAAKAATMLLFDLINSEEELNEIEIDTPKGIKVEMPIDHVVVGKNFVQCTILKFSG
DDKDITMGLEIQATVEKISKEEAEELSKKLISNESKIIVLDGGIGVGRVTKDGLFVAKGEPAINPVPRQMIIKEIESILP
KDKYVKVIISVPQGTEIGKKTFNPRLGIEGGISILGTSGIVYPMSEDALKASIKLEIKQKSLKNKNLILTFGNLGENYCK
SLGYIEEEIIICSNFIGFALECCVSCKVKSILIVGHIGKMSKIAYGCFNTHSRVCGVRLEVLALELTLLGYDVSLVNKVL
NEKTCEGAVKLLGSGYENLYKNIGKKILNSMKTYVYDELKIDAVMYYGASNPILLWSSCLE

Sequences:

>Translated_381_residues
MFEMYIESGMNKLRCGYTTGSCATGAAKAATMLLFDLINSEEELNEIEIDTPKGIKVEMPIDHVVVGKNFVQCTILKFSG
DDKDITMGLEIQATVEKISKEEAEELSKKLISNESKIIVLDGGIGVGRVTKDGLFVAKGEPAINPVPRQMIIKEIESILP
KDKYVKVIISVPQGTEIGKKTFNPRLGIEGGISILGTSGIVYPMSEDALKASIKLEIKQKSLKNKNLILTFGNLGENYCK
SLGYIEEEIIICSNFIGFALECCVSCKVKSILIVGHIGKMSKIAYGCFNTHSRVCGVRLEVLALELTLLGYDVSLVNKVL
NEKTCEGAVKLLGSGYENLYKNIGKKILNSMKTYVYDELKIDAVMYYGASNPILLWSSCLE
>Mature_381_residues
MFEMYIESGMNKLRCGYTTGSCATGAAKAATMLLFDLINSEEELNEIEIDTPKGIKVEMPIDHVVVGKNFVQCTILKFSG
DDKDITMGLEIQATVEKISKEEAEELSKKLISNESKIIVLDGGIGVGRVTKDGLFVAKGEPAINPVPRQMIIKEIESILP
KDKYVKVIISVPQGTEIGKKTFNPRLGIEGGISILGTSGIVYPMSEDALKASIKLEIKQKSLKNKNLILTFGNLGENYCK
SLGYIEEEIIICSNFIGFALECCVSCKVKSILIVGHIGKMSKIAYGCFNTHSRVCGVRLEVLALELTLLGYDVSLVNKVL
NEKTCEGAVKLLGSGYENLYKNIGKKILNSMKTYVYDELKIDAVMYYGASNPILLWSSCLE

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 41773; Mature: 41773

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEMYIESGMNKLRCGYTTGSCATGAAKAATMLLFDLINSEEELNEIEIDTPKGIKVEMP
CEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHCCEEEECCCCCEEEECC
IDHVVVGKNFVQCTILKFSGDDKDITMGLEIQATVEKISKEEAEELSKKLISNESKIIVL
CCEEEECCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DGGIGVGRVTKDGLFVAKGEPAINPVPRQMIIKEIESILPKDKYVKVIISVPQGTEIGKK
ECCCCCCCEECCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHH
TFNPRLGIEGGISILGTSGIVYPMSEDALKASIKLEIKQKSLKNKNLILTFGNLGENYCK
CCCCCCCCCCCCEEEECCCEEEECCCCHHEEEEEEEEEHHCCCCCCEEEEECCCCHHHHH
SLGYIEEEIIICSNFIGFALECCVSCKVKSILIVGHIGKMSKIAYGCFNTHSRVCGVRLE
HCCCCHHHHEEHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHEEE
VLALELTLLGYDVSLVNKVLNEKTCEGAVKLLGSGYENLYKNIGKKILNSMKTYVYDELK
EEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEE
IDAVMYYGASNPILLWSSCLE
EEEEEEECCCCCEEEHHHHCC
>Mature Secondary Structure
MFEMYIESGMNKLRCGYTTGSCATGAAKAATMLLFDLINSEEELNEIEIDTPKGIKVEMP
CEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHCCEEEECCCCCEEEECC
IDHVVVGKNFVQCTILKFSGDDKDITMGLEIQATVEKISKEEAEELSKKLISNESKIIVL
CCEEEECCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DGGIGVGRVTKDGLFVAKGEPAINPVPRQMIIKEIESILPKDKYVKVIISVPQGTEIGKK
ECCCCCCCEECCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHH
TFNPRLGIEGGISILGTSGIVYPMSEDALKASIKLEIKQKSLKNKNLILTFGNLGENYCK
CCCCCCCCCCCCEEEECCCEEEECCCCHHEEEEEEEEEHHCCCCCCEEEEECCCCHHHHH
SLGYIEEEIIICSNFIGFALECCVSCKVKSILIVGHIGKMSKIAYGCFNTHSRVCGVRLE
HCCCCHHHHEEHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHEEE
VLALELTLLGYDVSLVNKVLNEKTCEGAVKLLGSGYENLYKNIGKKILNSMKTYVYDELK
EEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEE
IDAVMYYGASNPILLWSSCLE
EEEEEEECCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA