| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935312
Identifier: 187935312
GI number: 187935312
Start: 2895854
End: 2896894
Strand: Reverse
Name: 187935312
Synonym: CLL_A2820
Alternate gene names: NA
Gene position: 2896894-2895854 (Counterclockwise)
Preceding gene: 187932595
Following gene: 187932374
Centisome position: 76.23
GC content: 28.72
Gene sequence:
>1041_bases ATGAAAATAACGAAAAGAGTTTTAGGAAGTGCTATAGCATTGACAGTAATTATGGGAGTGCCACAATATGTATCTGCCAA TGTACTAACAACAGCAAACAATGTGGTAACAACAGCAAACAATGTGGTAACAACAACAAATCAAGACGTATTTAATATGC CAAAATTCTCAACAGCATGGGGAAGCGTAAAGGAGAAAGGTGATAAGCAAATTCATATTAAAAATTCAAGTAACATAAAT AATGATATGATATTAAATATATCTGATGAAACTAAGATAATAGATGCAGTTAGTGGATTACCAGTTGCCATTAATGATAT AGATATAAATGATGATATTTATGCATATACTAGCCCAATAATGACAATGAGCTTACCACCAATTACAAATGCAGAACTTG TTATTGTTAACATTCCACAAGATTTTAAAGTACCTAATTATATTGAAGTTCAAAATGTAGTTAAAAATGATGATGGAAGT GTAACTGTTACAAGTGATGATGGTTTATTACAAGCAACTTTAGATAAAGATACTAGTATGTCACCATATTTAACAAGAAA TATTGTAACTACTGATAATATAGAAGTAGGATCAAAATTAGTTTTATGGACAAAGTATGATGTAAATGGAGTACAAACTC TACAACTTCCAGAAAAGGTTAATGTAGAAAAATGCATGATAATGCCTTATGAATATAGTGGAGTAATAAAAGCTTCTGCA GATAAATTAAATATTAATGGAGAAGATATTAGTTTTAAATATAGCGAAGCTCCATTTATGGAAGGTGAAACATTAATGCT TCCGTTAAATTTAGTTTCAGAAAAACTTGGATATGAAGTTAAGCCTTTTAATAAAACAACTATGCTTAACATTACAAAAG AAGGTTCTAAAACTTATACTGTAGCTATTGATAGCGAGATGTTAAAAACAGAAGATACTGAGCATTATTTAAGAAATAAA ACAATGGTAAAAAATAATAATATATTTGTAAGCTCAGAATTATTTAACTTAGCTGAAAATGCTAAGGTAGTAGTAGAATA G
Upstream 100 bases:
>100_bases TAGATATATTTAATATAAAATAATATTTTAAAAATAAATTTCTAATAAATGCAACATTTTACTTAGAAGGATTGTTTTAT AAGTGAAGGAGTTGATTTGA
Downstream 100 bases:
>100_bases TTTAGTAAGGATGTGTTTTAGTATTGTGTTCATATATGCATAAGCAATTTGGATGAGAAGTTAAAACACAGGTTGTATAA AAATAAGTATAAAAAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKITKRVLGSAIALTVIMGVPQYVSANVLTTANNVVTTANNVVTTTNQDVFNMPKFSTAWGSVKEKGDKQIHIKNSSNIN NDMILNISDETKIIDAVSGLPVAINDIDINDDIYAYTSPIMTMSLPPITNAELVIVNIPQDFKVPNYIEVQNVVKNDDGS VTVTSDDGLLQATLDKDTSMSPYLTRNIVTTDNIEVGSKLVLWTKYDVNGVQTLQLPEKVNVEKCMIMPYEYSGVIKASA DKLNINGEDISFKYSEAPFMEGETLMLPLNLVSEKLGYEVKPFNKTTMLNITKEGSKTYTVAIDSEMLKTEDTEHYLRNK TMVKNNNIFVSSELFNLAENAKVVVE
Sequences:
>Translated_346_residues MKITKRVLGSAIALTVIMGVPQYVSANVLTTANNVVTTANNVVTTTNQDVFNMPKFSTAWGSVKEKGDKQIHIKNSSNIN NDMILNISDETKIIDAVSGLPVAINDIDINDDIYAYTSPIMTMSLPPITNAELVIVNIPQDFKVPNYIEVQNVVKNDDGS VTVTSDDGLLQATLDKDTSMSPYLTRNIVTTDNIEVGSKLVLWTKYDVNGVQTLQLPEKVNVEKCMIMPYEYSGVIKASA DKLNINGEDISFKYSEAPFMEGETLMLPLNLVSEKLGYEVKPFNKTTMLNITKEGSKTYTVAIDSEMLKTEDTEHYLRNK TMVKNNNIFVSSELFNLAENAKVVVE >Mature_346_residues MKITKRVLGSAIALTVIMGVPQYVSANVLTTANNVVTTANNVVTTTNQDVFNMPKFSTAWGSVKEKGDKQIHIKNSSNIN NDMILNISDETKIIDAVSGLPVAINDIDINDDIYAYTSPIMTMSLPPITNAELVIVNIPQDFKVPNYIEVQNVVKNDDGS VTVTSDDGLLQATLDKDTSMSPYLTRNIVTTDNIEVGSKLVLWTKYDVNGVQTLQLPEKVNVEKCMIMPYEYSGVIKASA DKLNINGEDISFKYSEAPFMEGETLMLPLNLVSEKLGYEVKPFNKTTMLNITKEGSKTYTVAIDSEMLKTEDTEHYLRNK TMVKNNNIFVSSELFNLAENAKVVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38288; Mature: 38288
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITKRVLGSAIALTVIMGVPQYVSANVLTTANNVVTTANNVVTTTNQDVFNMPKFSTAW CCCHHHHHHHHHHHHHHHCCCCHHCCEEEEECCCEEEECCCEEEECCCCHHCCCCCCCCC GSVKEKGDKQIHIKNSSNINNDMILNISDETKIIDAVSGLPVAINDIDINDDIYAYTSPI CCHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEHHCCCEEEEEEEECCCCEEEEECCE MTMSLPPITNAELVIVNIPQDFKVPNYIEVQNVVKNDDGSVTVTSDDGLLQATLDKDTSM EEEECCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCEEEECCCCEEEEEECCCCCC SPYLTRNIVTTDNIEVGSKLVLWTKYDVNGVQTLQLPEKVNVEKCMIMPYEYSGVIKASA CCEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCEEEECC DKLNINGEDISFKYSEAPFMEGETLMLPLNLVSEKLGYEVKPFNKTTMLNITKEGSKTYT CEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHCCEECCCCCEEEEEEEECCCEEEE VAIDSEMLKTEDTEHYLRNKTMVKNNNIFVSSELFNLAENAKVVVE EEECCHHHCCCCHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEC >Mature Secondary Structure MKITKRVLGSAIALTVIMGVPQYVSANVLTTANNVVTTANNVVTTTNQDVFNMPKFSTAW CCCHHHHHHHHHHHHHHHCCCCHHCCEEEEECCCEEEECCCEEEECCCCHHCCCCCCCCC GSVKEKGDKQIHIKNSSNINNDMILNISDETKIIDAVSGLPVAINDIDINDDIYAYTSPI CCHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEHHCCCEEEEEEEECCCCEEEEECCE MTMSLPPITNAELVIVNIPQDFKVPNYIEVQNVVKNDDGSVTVTSDDGLLQATLDKDTSM EEEECCCCCCCCEEEEECCCCCCCCCEEEEEHHHCCCCCCEEEECCCCEEEEEECCCCCC SPYLTRNIVTTDNIEVGSKLVLWTKYDVNGVQTLQLPEKVNVEKCMIMPYEYSGVIKASA CCEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCEEEECC DKLNINGEDISFKYSEAPFMEGETLMLPLNLVSEKLGYEVKPFNKTTMLNITKEGSKTYT CEEECCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHCCEECCCCCEEEEEEEECCCEEEE VAIDSEMLKTEDTEHYLRNKTMVKNNNIFVSSELFNLAENAKVVVE EEECCHHHCCCCHHHHHHCCEEEECCCEEEEHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA