| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ilvB [H]
Identifier: 187935263
GI number: 187935263
Start: 729779
End: 731458
Strand: Reverse
Name: ilvB [H]
Synonym: CLL_A0727
Alternate gene names: 187935263
Gene position: 731458-729779 (Counterclockwise)
Preceding gene: 187933702
Following gene: 187933666
Centisome position: 19.25
GC content: 30.48
Gene sequence:
>1680_bases ATGAAATACAATTGTGCGGAAATAGTTATTAAATTATTGGAAAATCAAGGTGTAAAATATATTGCTGGAATTCCTGGTGG GTTTAACCTTCCAATATATGATGCTTTATATAAAAGTAATATAACTCATATCTTAGCTAGACATGAACAAGGTGCTGCTT TTATAGCTCAAGGTATCTCAAGAAGTACAGGTAAACCCGGAGTATGCTTTGCAACATCTGGTCCGGGGGCTACAAATTTA CTTACTGCTATTGCTGATGCTAAATTAGATTCTATTCCTCTAATTGCAATAACTGGACAAGTGCCTCTTTCCGCTATTGG TACAGATGCTTTTCAAGAAGTTGATGCATATGGACTAACTATCCCTATTACTAAGCATAATTTTTTAGTTAGGAATTCCA AAGATCTTTTTACTATTATCCCAGAAGCTTTTAAAATATCAATGGAAGGCCGTCCTGGCCCTGTACTGATAGATATTCCA AAAAATATTCAAACCGAAATAATAGAAGTGGATGAAAATATTTTTAAACAAACCAAAAAAGATAATCATAAAAAAAAATC TCCTAAAAGTTATAAACTTGAATGTATTGCTGAATTAATTAATACAGCAAAAAAGCCTATTATTTATGCTGGGGGAGGTA TCATTAGTGCTAATGCCTCTAATAATCTATATGCATTATCTAAAAAAAGTAATATTCCAGTTGCTTTAAGCTTAATGGGA TTAGGCGCATTTTCATCTAATGATGTTTTAAATTTAGGAATGCTTGGAATGCATGGAGCCCCTTATACAAATTATCTACT TAACGAAGCAGATTTAATATTAGCATTTGGTGTTAGATTTGATGATAGAGCCACTGGAAATATAAATACATTTTGTCCTA AAGCTACAATAATCCATATAGATATTGATCCTGCTGAAATTAACAAAGTTAAAATTAGTAGCCTATCTATGAATGAAAAT ATTAAGTATTTCTTAGAGGATATTTTACCTCTTGTTAATAATAAAGAAAGAACAACCTGGATAGAACGAGTTAAATGCTT TAAAAAAGATTATCCACTTCCTCAATTTGATAATCCTCTACATCCAACCAACATAATTTCTTTCGTAGGTAATACTGTTT CTGATGATACGATAATTGTTACTGATGTAGGTGAACATCAAATGTGGACAGCTCAAAGATATCCTTTTAAGTATCCTAGA ACTTTTTTGACTTCTGGTGGCTTAGGGACAATGGGATTTGGACTTCCTGCTGCAATTGGTGCTGCATTAGCAAATAAAGA AAAACAAGTTATTTGCTTTTCTGGTGATGGTTCAATTTTAATGAATATCCAAGAACTTTCAACACTTAAAGATCTAGATT TAAATATAAAAATAATAATATTAAATAATCATCATTTAGGATTGGTTCGCCAACAACAAGAATTATTTTATAACAAACAC TTCATTGCATCAAAATTTATATCAAATCCCGATTTTAAATTAATTGCTAATGGCTTCGGAATAAATAGTTGTACTTTCTC ACAAGAAAATGATTCATTTGAAAAATTAGAAGATATATTATCAAAACCTGGTCCTTATTTAATAAATATACTAATTAATG AAACTGAAAATGTACTACCTATGGTTTATCCTGGTGGTGCAAATACAAAAATGATTGGTGGTGCAAATTTATATGATTAA
Upstream 100 bases:
>100_bases TTAAAATAGTATCTAGGTAAGCTTCTCTTCGTCCTATTTTATTTGGATGAAGATTTTTTTATATATCTATAGGCTAATTT TTGAAAGAGGAGTGATTTAT
Downstream 100 bases:
>100_bases TACTGATTTTTATCTCGTTGAATTGCTTGTAAGAAATCATCCTGGAGTAATGAGTCATATAACAGGATTGTTTGCTAGAA GAGCTTTTAATTTAGAAGGG
Product: acetolactate synthase, large subunit, biosynthetic type
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKYNCAEIVIKLLENQGVKYIAGIPGGFNLPIYDALYKSNITHILARHEQGAAFIAQGISRSTGKPGVCFATSGPGATNL LTAIADAKLDSIPLIAITGQVPLSAIGTDAFQEVDAYGLTIPITKHNFLVRNSKDLFTIIPEAFKISMEGRPGPVLIDIP KNIQTEIIEVDENIFKQTKKDNHKKKSPKSYKLECIAELINTAKKPIIYAGGGIISANASNNLYALSKKSNIPVALSLMG LGAFSSNDVLNLGMLGMHGAPYTNYLLNEADLILAFGVRFDDRATGNINTFCPKATIIHIDIDPAEINKVKISSLSMNEN IKYFLEDILPLVNNKERTTWIERVKCFKKDYPLPQFDNPLHPTNIISFVGNTVSDDTIIVTDVGEHQMWTAQRYPFKYPR TFLTSGGLGTMGFGLPAAIGAALANKEKQVICFSGDGSILMNIQELSTLKDLDLNIKIIILNNHHLGLVRQQQELFYNKH FIASKFISNPDFKLIANGFGINSCTFSQENDSFEKLEDILSKPGPYLINILINETENVLPMVYPGGANTKMIGGANLYD
Sequences:
>Translated_559_residues MKYNCAEIVIKLLENQGVKYIAGIPGGFNLPIYDALYKSNITHILARHEQGAAFIAQGISRSTGKPGVCFATSGPGATNL LTAIADAKLDSIPLIAITGQVPLSAIGTDAFQEVDAYGLTIPITKHNFLVRNSKDLFTIIPEAFKISMEGRPGPVLIDIP KNIQTEIIEVDENIFKQTKKDNHKKKSPKSYKLECIAELINTAKKPIIYAGGGIISANASNNLYALSKKSNIPVALSLMG LGAFSSNDVLNLGMLGMHGAPYTNYLLNEADLILAFGVRFDDRATGNINTFCPKATIIHIDIDPAEINKVKISSLSMNEN IKYFLEDILPLVNNKERTTWIERVKCFKKDYPLPQFDNPLHPTNIISFVGNTVSDDTIIVTDVGEHQMWTAQRYPFKYPR TFLTSGGLGTMGFGLPAAIGAALANKEKQVICFSGDGSILMNIQELSTLKDLDLNIKIIILNNHHLGLVRQQQELFYNKH FIASKFISNPDFKLIANGFGINSCTFSQENDSFEKLEDILSKPGPYLINILINETENVLPMVYPGGANTKMIGGANLYD >Mature_559_residues MKYNCAEIVIKLLENQGVKYIAGIPGGFNLPIYDALYKSNITHILARHEQGAAFIAQGISRSTGKPGVCFATSGPGATNL LTAIADAKLDSIPLIAITGQVPLSAIGTDAFQEVDAYGLTIPITKHNFLVRNSKDLFTIIPEAFKISMEGRPGPVLIDIP KNIQTEIIEVDENIFKQTKKDNHKKKSPKSYKLECIAELINTAKKPIIYAGGGIISANASNNLYALSKKSNIPVALSLMG LGAFSSNDVLNLGMLGMHGAPYTNYLLNEADLILAFGVRFDDRATGNINTFCPKATIIHIDIDPAEINKVKISSLSMNEN IKYFLEDILPLVNNKERTTWIERVKCFKKDYPLPQFDNPLHPTNIISFVGNTVSDDTIIVTDVGEHQMWTAQRYPFKYPR TFLTSGGLGTMGFGLPAAIGAALANKEKQVICFSGDGSILMNIQELSTLKDLDLNIKIIILNNHHLGLVRQQQELFYNKH FIASKFISNPDFKLIANGFGINSCTFSQENDSFEKLEDILSKPGPYLINILINETENVLPMVYPGGANTKMIGGANLYD
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=581, Percent_Identity=22.7194492254733, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI93004078, Length=477, Percent_Identity=26.6247379454927, Blast_Score=132, Evalue=7e-31, Organism=Escherichia coli, GI1790104, Length=558, Percent_Identity=51.6129032258064, Blast_Score=599, Evalue=1e-172, Organism=Escherichia coli, GI87081685, Length=567, Percent_Identity=39.3298059964727, Blast_Score=424, Evalue=1e-120, Organism=Escherichia coli, GI1786717, Length=564, Percent_Identity=29.2553191489362, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1787096, Length=548, Percent_Identity=25.7299270072993, Blast_Score=171, Evalue=9e-44, Organism=Escherichia coli, GI1788716, Length=476, Percent_Identity=25.4201680672269, Blast_Score=128, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17542570, Length=590, Percent_Identity=24.406779661017, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17531299, Length=580, Percent_Identity=25.3448275862069, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17531301, Length=580, Percent_Identity=25.3448275862069, Blast_Score=117, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323755, Length=567, Percent_Identity=40.2116402116402, Blast_Score=413, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6320588, Length=539, Percent_Identity=21.7068645640074, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6320816, Length=570, Percent_Identity=21.4035087719298, Blast_Score=82, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323163, Length=466, Percent_Identity=23.3905579399142, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323073, Length=479, Percent_Identity=22.964509394572, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321524, Length=478, Percent_Identity=21.3389121338912, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922626, Length=481, Percent_Identity=27.2349272349272, Blast_Score=165, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61335; Mature: 61335
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNCAEIVIKLLENQGVKYIAGIPGGFNLPIYDALYKSNITHILARHEQGAAFIAQGIS CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHH RSTGKPGVCFATSGPGATNLLTAIADAKLDSIPLIAITGQVPLSAIGTDAFQEVDAYGLT CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHHHHHCCEE IPITKHNFLVRNSKDLFTIIPEAFKISMEGRPGPVLIDIPKNIQTEIIEVDENIFKQTKK EEEECCEEEEECCCCEEEECCCEEEEEECCCCCCEEEECCCCCCCCEEEHHHHHHHHHHH DNHKKKSPKSYKLECIAELINTAKKPIIYAGGGIISANASNNLYALSKKSNIPVALSLMG CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEECCCCCCEEEEEEE LGAFSSNDVLNLGMLGMHGAPYTNYLLNEADLILAFGVRFDDRATGNINTFCPKATIIHI CCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEECCEECCCCCCCCCEECCCEEEEEE DIDPAEINKVKISSLSMNENIKYFLEDILPLVNNKERTTWIERVKCFKKDYPLPQFDNPL ECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC HPTNIISFVGNTVSDDTIIVTDVGEHQMWTAQRYPFKYPRTFLTSGGLGTMGFGLPAAIG CHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHH AALANKEKQVICFSGDGSILMNIQELSTLKDLDLNIKIIILNNHHLGLVRQQQELFYNKH HHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHH FIASKFISNPDFKLIANGFGINSCTFSQENDSFEKLEDILSKPGPYLINILINETENVLP HHHHHHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEE MVYPGGANTKMIGGANLYD EEECCCCCCEEECCCCCCC >Mature Secondary Structure MKYNCAEIVIKLLENQGVKYIAGIPGGFNLPIYDALYKSNITHILARHEQGAAFIAQGIS CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHH RSTGKPGVCFATSGPGATNLLTAIADAKLDSIPLIAITGQVPLSAIGTDAFQEVDAYGLT CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCHHHHHHHHCCEE IPITKHNFLVRNSKDLFTIIPEAFKISMEGRPGPVLIDIPKNIQTEIIEVDENIFKQTKK EEEECCEEEEECCCCEEEECCCEEEEEECCCCCCEEEECCCCCCCCEEEHHHHHHHHHHH DNHKKKSPKSYKLECIAELINTAKKPIIYAGGGIISANASNNLYALSKKSNIPVALSLMG CCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEECCCCCCEEEEEEE LGAFSSNDVLNLGMLGMHGAPYTNYLLNEADLILAFGVRFDDRATGNINTFCPKATIIHI CCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEECCEECCCCCCCCCEECCCEEEEEE DIDPAEINKVKISSLSMNENIKYFLEDILPLVNNKERTTWIERVKCFKKDYPLPQFDNPL ECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC HPTNIISFVGNTVSDDTIIVTDVGEHQMWTAQRYPFKYPRTFLTSGGLGTMGFGLPAAIG CHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHH AALANKEKQVICFSGDGSILMNIQELSTLKDLDLNIKIIILNNHHLGLVRQQQELFYNKH HHHCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHH FIASKFISNPDFKLIANGFGINSCTFSQENDSFEKLEDILSKPGPYLINILINETENVLP HHHHHHHCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEE MVYPGGANTKMIGGANLYD EEECCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]