| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935085
Identifier: 187935085
GI number: 187935085
Start: 2196495
End: 2196854
Strand: Reverse
Name: 187935085
Synonym: CLL_A2101
Alternate gene names: NA
Gene position: 2196854-2196495 (Counterclockwise)
Preceding gene: 187934454
Following gene: 187933018
Centisome position: 57.81
GC content: 29.17
Gene sequence:
>360_bases ATGGTGATGAGACATTTTAAATATGACATGCCAACCATATGTCTTTATCATTCTTCAAATTTAGAAGACTTAACTAAATT TAATGAAATTTTATGGGGACTAGAGGAAGAAGGAATACCTTGTAATATATCAAGTAAAGAAGATTCCTTAAGTTCAGAAG AGCTTAGTCATATGGCTTCACAAGATTCAAAATTAGCAGTAGGTATAGGAATTGATAAAAGTGGAAAAATAACATTAACT TTAAATAAACTTAAAAAATATGAACCTTTGTTTACTGTTAGTCTGAATGATGAAGATAAAGTTCTAAGAGCTTTAGGAGC TAATGCAGGAAGATTAGTTAAAGGAATTGCTTTTAAGTAG
Upstream 100 bases:
>100_bases TAGTAGCTGGAAGAGGAAATATAAGAGGATCAGAAGGACCAAGAAATGCTGTAGCTACAGGACTTGTATTGGCTTTTGAT GGAAATGGAGAAAGTAAGTA
Downstream 100 bases:
>100_bases AGTATAAGGAGTAGTTATATTATGAAAATTTATACTAAAACGGGTGATAAAGGAACTACCGCTTTGTATGGTGGCAGTAG AGTAGATAAAGATAGTTTAA
Product: glycerol dehydratase reactivation factor, small subunit
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVMRHFKYDMPTICLYHSSNLEDLTKFNEILWGLEEEGIPCNISSKEDSLSSEELSHMASQDSKLAVGIGIDKSGKITLT LNKLKKYEPLFTVSLNDEDKVLRALGANAGRLVKGIAFK
Sequences:
>Translated_119_residues MVMRHFKYDMPTICLYHSSNLEDLTKFNEILWGLEEEGIPCNISSKEDSLSSEELSHMASQDSKLAVGIGIDKSGKITLT LNKLKKYEPLFTVSLNDEDKVLRALGANAGRLVKGIAFK >Mature_119_residues MVMRHFKYDMPTICLYHSSNLEDLTKFNEILWGLEEEGIPCNISSKEDSLSSEELSHMASQDSKLAVGIGIDKSGKITLT LNKLKKYEPLFTVSLNDEDKVLRALGANAGRLVKGIAFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010254 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13277; Mature: 13277
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMRHFKYDMPTICLYHSSNLEDLTKFNEILWGLEEEGIPCNISSKEDSLSSEELSHMAS CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC QDSKLAVGIGIDKSGKITLTLNKLKKYEPLFTVSLNDEDKVLRALGANAGRLVKGIAFK CCCEEEEEECCCCCCEEEEEEHHCCCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCC >Mature Secondary Structure MVMRHFKYDMPTICLYHSSNLEDLTKFNEILWGLEEEGIPCNISSKEDSLSSEELSHMAS CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC QDSKLAVGIGIDKSGKITLTLNKLKKYEPLFTVSLNDEDKVLRALGANAGRLVKGIAFK CCCEEEEEECCCCCCEEEEEEHHCCCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA