| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yvgK [H]
Identifier: 187935080
GI number: 187935080
Start: 3143868
End: 3144821
Strand: Reverse
Name: yvgK [H]
Synonym: CLL_A3044
Alternate gene names: 187935080
Gene position: 3144821-3143868 (Counterclockwise)
Preceding gene: 187932828
Following gene: 187933353
Centisome position: 82.75
GC content: 27.25
Gene sequence:
>954_bases GTGGACTCAGAAAGATCATTGACTGCACTTGAAGTATCAGAATTATTAAAAATAAATAAAAATACAGTTTATGAACTTGT AAAGAGAGGCGAATTACCTGGATATAAGATAGGAAAAAAATTAAGGATAGATGAAAAAGATGTTTTTGAATATATAAATA ATCAAAAATCTTCTTCAAAAAATAGTAAAAATATCACGAAAAGTTATTTGAAGAATGATGTAAATATAAATTCTGAATTT AAAATAGAAAATGATATCATAATTTCAGGACAAGATATTATTTTAGATGTTTTAGCTCGTCATATTGAAGAAAAAACTGA TAATATTAGAGTTTTACGTTCAAATGTTGGCAGTTATACAAGCTTGTATGATTTATATAATGATAAGATATCAATATCAT CATCACATCTTTGGGATGGTGATACAAATGAATATAATACAGCTTATGTAAGACGATTAATTCCAGGTATTCCATGTATA CTAATTAATTTAGCATATAGAAGACAAGGATTTTATGTAGCTAAAGGAAATCCACATAACATAACAACATGGGATGATTT AATAAAAAGCGATATAAGTATAGTGAATAGAGAAAAGGGATCAGGTACTAGAGTATTGTTAGATGAGAAATTAAGATTAT ATAATGTTGAAGGCGAGTCTATTAAAGGTTATAACTTCGAACAATCATCTCATTTAGCAGTAGCAAGCAGTATAGCTGTG GGTGATGGAGACTTAGGAATAGGAATAGAAAAGGTTGCTCATCAAGTAAGTGAAATTGATTTTGTACCTATACAAGAAGA ACGATATGATTTGATTATAAAAAAATCATTTTTAAAATATCCACTTTATAAGTTAATAATTGAAATAATTCAATCTAAAG AATTCAAAAAGGAAATCAAAGGGTTGGGTGAATATGATTTAAGAGATACAGGTAAGATTCTTGCCGAAACTTAA
Upstream 100 bases:
>100_bases TTCTTAATGATAGAATTAATAAGAAGTGAAATCTTCATTAGAAAGATAAATAGTTTTTTATGAAATGTTATAGCTAGATT ATACAAGGGGGGGATTAATT
Downstream 100 bases:
>100_bases AAGTTAGCTTTAAGCTAAAGTATATATGAAATATTATTTAGAAGATATATTTTGGAGGAATTATGAATAATGTTACCATG CAGGAACTTAGGAATTTAGA
Product: periplasmic molybdate-binding protein/domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET
Sequences:
>Translated_317_residues MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET >Mature_317_residues MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36164; Mature: 36164
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSK CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC NSKNITKSYLKNDVNINSEFKIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYT CHHHHHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHCCCCCEEEHHCCCCHH SLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCILINLAYRRQGFYVAKGNPHN HHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCEEEECCCCCC ITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV CCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIK CCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLGEYDLRDTGKILAET CCCCCCCCCCCHHCCCC >Mature Secondary Structure MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSK CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC NSKNITKSYLKNDVNINSEFKIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYT CHHHHHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHCCCCCEEEHHCCCCHH SLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCILINLAYRRQGFYVAKGNPHN HHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCEEEECCCCCC ITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV CCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIK CCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLGEYDLRDTGKILAET CCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]