| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934889
Identifier: 187934889
GI number: 187934889
Start: 2005160
End: 2005468
Strand: Reverse
Name: 187934889
Synonym: CLL_A1915
Alternate gene names: NA
Gene position: 2005468-2005160 (Counterclockwise)
Preceding gene: 187935662
Following gene: 187935524
Centisome position: 52.77
GC content: 29.13
Gene sequence:
>309_bases ATGAAAAAATTATTTATATCACAACCAATGAGAGGACTAAAAGATGAAGAAATTCTTAAAGCAAGAGAAGAAATTCGTAT TAAAGCAGAAAAGGAAATAGGTGAGTCTGTAGAATTAATAGATTCATTTATTGAAGATTATCCAGGAGAAATTAATAAAA GTATACCTGTTTGGTATTTAGGAAAATCAATACAATTTCTTTCACAAGCTGATGTTGCTTATTTCGGTGGAGATTGGAGA AATGCAAGAGGTTGCAACATTGAACATGAAATAGCTGTTCAATATGGAATAAATAGATTAGAAGATTAA
Upstream 100 bases:
>100_bases CAATAATGCTAATATTTAATATAATAGTTACTATTGCTTTGTTTAATGGAATATTTGACAGCCTATAGGGACTTATTTTT ATTTTAGGAGGAATTGAAAG
Downstream 100 bases:
>100_bases TAATTGACTTTAAGCAATAGTCATTAAACAGGCTTATTTTTATGCAAAAATTTATACTCTAAGGGCAAGTACTTTAGGGG ATAGGAGGAATATAACAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKKLFISQPMRGLKDEEILKAREEIRIKAEKEIGESVELIDSFIEDYPGEINKSIPVWYLGKSIQFLSQADVAYFGGDWR NARGCNIEHEIAVQYGINRLED
Sequences:
>Translated_102_residues MKKLFISQPMRGLKDEEILKAREEIRIKAEKEIGESVELIDSFIEDYPGEINKSIPVWYLGKSIQFLSQADVAYFGGDWR NARGCNIEHEIAVQYGINRLED >Mature_102_residues MKKLFISQPMRGLKDEEILKAREEIRIKAEKEIGESVELIDSFIEDYPGEINKSIPVWYLGKSIQFLSQADVAYFGGDWR NARGCNIEHEIAVQYGINRLED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11792; Mature: 11792
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFISQPMRGLKDEEILKAREEIRIKAEKEIGESVELIDSFIEDYPGEINKSIPVWYL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC GKSIQFLSQADVAYFGGDWRNARGCNIEHEIAVQYGINRLED CCHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCHHHCCC >Mature Secondary Structure MKKLFISQPMRGLKDEEILKAREEIRIKAEKEIGESVELIDSFIEDYPGEINKSIPVWYL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC GKSIQFLSQADVAYFGGDWRNARGCNIEHEIAVQYGINRLED CCHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA