| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934857
Identifier: 187934857
GI number: 187934857
Start: 2015088
End: 2015612
Strand: Reverse
Name: 187934857
Synonym: CLL_A1929
Alternate gene names: NA
Gene position: 2015612-2015088 (Counterclockwise)
Preceding gene: 187934451
Following gene: 187933636
Centisome position: 53.04
GC content: 25.14
Gene sequence:
>525_bases ATGCAAAAATATAAAAGAATACTTTATAAGGAAACAGAAGATAAATTATATAAATATTTCAATAGAGATAGGATATATAA AGGTTTGAATAGTCAATTAATTGTATTAAATAAACAGATAGATCAATTAAATAATGAACTAAAAAATTGTAAATATATCA ATGTAGATGAAGAATCATCATCACCAAGTTTTGATGAACGTGTACAAACATCATCTAGTTGTACAAGTTATGTTGAAAGC CAAGTAATTAAATTAACAGATATGAAGTTAAGAAGAAAAGAAAAAAAAGAACTGGAAAGAGAAAACATATTAAGTCAATT GGGTGATCTTGAATCAATAGTAGCAGAAATGGAATGGAAAGTAGATCAACTTGAAAATGATTATAAAAGAATGCTTTCAA TGATATACAAAGAGAACATGAATGAAGTTCAAATATCTTTTAAATTGCATCTAAGCCAAAGCCAAGTAAATAAGAGAAAA AATAAGATACTAGAGCATATATTCATGTGGGAAAAATGGAATTAA
Upstream 100 bases:
>100_bases TTATGCTTATCAAAAAGAAAGTGGAGTAAGAAGAAAAAAATCTTCTAATGTAAGATACGGTGGATATAGGTGGTAATCCT AATAGATTAGGAGGGATAGG
Downstream 100 bases:
>100_bases ACGATATGTAAATTTGATGCAGTAAATTAAGAAAAATGTTTTTAAAAATTGAATAATGCAGTATTGATAATATATGCTAA AATAGGAATTGTAAGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQKYKRILYKETEDKLYKYFNRDRIYKGLNSQLIVLNKQIDQLNNELKNCKYINVDEESSSPSFDERVQTSSSCTSYVES QVIKLTDMKLRRKEKKELERENILSQLGDLESIVAEMEWKVDQLENDYKRMLSMIYKENMNEVQISFKLHLSQSQVNKRK NKILEHIFMWEKWN
Sequences:
>Translated_174_residues MQKYKRILYKETEDKLYKYFNRDRIYKGLNSQLIVLNKQIDQLNNELKNCKYINVDEESSSPSFDERVQTSSSCTSYVES QVIKLTDMKLRRKEKKELERENILSQLGDLESIVAEMEWKVDQLENDYKRMLSMIYKENMNEVQISFKLHLSQSQVNKRK NKILEHIFMWEKWN >Mature_174_residues MQKYKRILYKETEDKLYKYFNRDRIYKGLNSQLIVLNKQIDQLNNELKNCKYINVDEESSSPSFDERVQTSSSCTSYVES QVIKLTDMKLRRKEKKELERENILSQLGDLESIVAEMEWKVDQLENDYKRMLSMIYKENMNEVQISFKLHLSQSQVNKRK NKILEHIFMWEKWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21121; Mature: 21121
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKYKRILYKETEDKLYKYFNRDRIYKGLNSQLIVLNKQIDQLNNELKNCKYINVDEESS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCEEECCCCCCC SPSFDERVQTSSSCTSYVESQVIKLTDMKLRRKEKKELERENILSQLGDLESIVAEMEWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDQLENDYKRMLSMIYKENMNEVQISFKLHLSQSQVNKRKNKILEHIFMWEKWN HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQKYKRILYKETEDKLYKYFNRDRIYKGLNSQLIVLNKQIDQLNNELKNCKYINVDEESS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCEEECCCCCCC SPSFDERVQTSSSCTSYVESQVIKLTDMKLRRKEKKELERENILSQLGDLESIVAEMEWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDQLENDYKRMLSMIYKENMNEVQISFKLHLSQSQVNKRKNKILEHIFMWEKWN HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA